DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and tmprss3

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_031752328.1 Gene:tmprss3 / 100490444 XenbaseID:XB-GENE-994580 Length:483 Species:Xenopus tropicalis


Alignment Length:240 Identity:81/240 - (33%)
Similarity:118/240 - (49%) Gaps:24/240 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTI 93
            :.|:|||..:...|:|.|.||...|.|.||||::|..:|:||||||.:     ::.|   |.:.:
 Frog   241 SARIVGGNVSAVGQWPWQASLVFQGVHLCGGSLITPQWIVTAAHCVYD-----LLYP---EWWRV 297

  Fly    94 RAG--SNDRFSGGVLVQVAEVIVHEEY--GNFLNDVALLRLESPLILSASIQPIDLPTV--DTPA 152
            :.|  |....|....|.|.::|.|.:|  ....||:||:||.||...:.|||||.||..  |.|.
 Frog   298 QVGQVSQASESAQTAVPVQKIIYHSKYRSSTMANDIALIRLASPFTFNGSIQPICLPNYREDFPE 362

  Fly   153 DVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFG--FEGELCLLHQVDNG--ACNGD 213
            .....|||||..:..||..:.:.|..:..|:.:.|.....:|  .:..:.....::.|  .|.||
 Frog   363 GKICWISGWGATEEGGDTSQTMDYAGVPLISNRVCNTKYIYGGVIKPSMVCAGFLEGGVDTCQGD 427

  Fly   214 SGGPAVYNN----QLVGVAGFVVDGCGSTYPDG-YARVFYFKDWI 253
            ||||....:    :|:|...:.: ||...|..| |.|:..|.|||
 Frog   428 SGGPLACEDSNVWKLMGTTSWGI-GCALRYKPGVYTRISSFLDWI 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 80/237 (34%)
tmprss3XP_031752328.1 LDLa 96..128 CDD:197566
SRCR_2 136..236 CDD:464747
Tryp_SPc 244..472 CDD:238113 80/237 (34%)
Blue background indicates that the domain is not in the aligned region.

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