DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and hgfac

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_002939269.3 Gene:hgfac / 100485696 XenbaseID:XB-GENE-940012 Length:595 Species:Xenopus tropicalis


Alignment Length:269 Identity:69/269 - (25%)
Similarity:114/269 - (42%) Gaps:43/269 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VLPVQSAPGK-------LNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVS 75
            |:|.....||       ..||::||..|:....|....: ..|::.|.||::...::::||||.:
 Frog   331 VVPAPPKCGKKHEKRVVARGRILGGNSALPGSHPWVAGI-YIGNYFCAGSLIQPCWVVSAAHCFA 394

  Fly    76 NEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFL---NDVALLRLESPLILS 137
            :......|..:..:.|     .|.........:|...|.:::|..|.   :|:.|::|:.  |.:
 Frog   395 DSPSKSKIRVVLGQHF-----FNQTTDVTQTFEVERYIFYDKYSVFKRNEHDIVLIKLKR--INN 452

  Fly   138 AS------IQPIDLPTVDTP--ADVDVVISGWGRIKHQGDLPRY---LQYNTLKSITRQQCEELI 191
            |.      :|.|.||.|..|  .|....|:||||: |: |...|   ||...:..:...:|....
 Frog   453 ACAKKTQFVQTICLPDVSAPFADDHHCQIAGWGRM-HE-DSTEYAQNLQEAIVPLVPDNKCSSPE 515

  Fly   192 DFG---FEGELCLLH---QVDNGACNGDSGGPAVYNNQLVGVAGFVV---DGCGS-TYPDGYARV 246
            .:|   .|...|..:   .:|  :|.||||||.......:.....:|   :|||: ..|..|.:|
 Frog   516 IYGAEISENMFCAGYFDCTID--SCQGDSGGPLACEKDKISYLWGIVSWGEGCGNHNKPGVYTKV 578

  Fly   247 FYFKDWIKK 255
            ..:.|||.:
 Frog   579 SNYVDWINR 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 63/248 (25%)
hgfacXP_002939269.3 FN2 52..98 CDD:238019
EGF_CA 109..145 CDD:238011
FN1 147..185 CDD:238018
KR 235..319 CDD:412161
Tryp_SPc 352..588 CDD:238113 63/248 (25%)
Blue background indicates that the domain is not in the aligned region.

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