DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and gzma

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_012808240.1 Gene:gzma / 100135014 XenbaseID:XB-GENE-482759 Length:267 Species:Xenopus tropicalis


Alignment Length:272 Identity:76/272 - (27%)
Similarity:119/272 - (43%) Gaps:54/272 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLCSFLLFLVLPVQSAPGKLNGR----VVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILT 69
            ||.|.||.:         .:||.    ::.|.:|..:..|:...:.:. :.||||:::.:.::||
 Frog    17 LLSSILLLI---------HINGNICMDIIDGREAASHSRPYMAYIYSR-TGSCGGTLIKQNWVLT 71

  Fly    70 AAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHE--EYGNFLNDVALLRLES 132
            |||||.|.  :.||  :.|.:...|.....|||      ||..|.|.  |:...::|:.||:::.
 Frog    72 AAHCVVNN--SEVI--LGAHKVKSRENEQQRFS------VARAIPHPCFEWKKKIHDIQLLQIKG 126

  Fly   133 PLILSASIQPIDLPTVDTPADVDV------VISGWGRIKHQGDLPR-YLQYNTLKSITRQQCEEL 190
            ...|:..:..:.|||    .|:||      ..:|||..|..|..|. .|:...:..:.|..|.::
 Frog   127 AAKLNKFVSVLKLPT----TDMDVKPGSSCSTAGWGVTKPNGKTPSDVLREVNVTVVDRGTCNKI 187

  Fly   191 IDFGFEGE-----LCL----LHQVDNGACNGDSGGPAVYNNQLVGVAGFVVDG--CGS-TYPDGY 243
            .. .|:.|     ||.    .......||.||||||.:...:..|:..|   |  ||. .||..|
 Frog   188 YK-KFKTEISTNMLCAGAPKKSDKKYDACQGDSGGPLICGKEFSGIVSF---GKKCGDPKYPGIY 248

  Fly   244 ARV-FYFKDWIK 254
            .|: ..:..||:
 Frog   249 TRLTARYLQWIR 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 69/245 (28%)
gzmaXP_012808240.1 Tryp_SPc 35..262 CDD:238113 69/245 (28%)

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