DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15450 and gpat4

DIOPT Version :9

Sequence 1:NP_608409.1 Gene:CG15450 / 33064 FlyBaseID:FBgn0031132 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001123822.1 Gene:gpat4 / 100170573 XenbaseID:XB-GENE-999686 Length:453 Species:Xenopus tropicalis


Alignment Length:444 Identity:168/444 - (37%)
Similarity:243/444 - (54%) Gaps:71/444 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVFLGILLWASF--------------FWLQCRYLDVLELLFAWIGNQLAETRRRRAREERCR--- 52
            |:.|.:.||.:.              |.::..|:..|..:|.|     |..|..|..:|...   
 Frog    14 LLGLSLTLWFTLLLVFIIVPAIFGVSFGIRRLYMKTLLRIFTW-----ATLRIERGIKENSHALY 73

  Fly    53 -------LGKK--------WAVGNKGDGMEKLLSPPIKNRLNIRVEQCCDFITAGLGLVLEDDVT 102
                   :.|:        |.:...|..::         |....:.....|...|:..:::|:||
 Frog    74 KPLSNGIIAKESTSFEEGIWELRGNGRSLD---------RPEFELSDIFYFCRQGMESIVDDEVT 129

  Fly   103 QRFVAPPSPAGE----WNLLTRNLRQRNRYLSWRLRTVWLLGWVVRYGLLLPFRTIGCWLCLFMI 163
            |||      :||    ||||||. ....:::|.||..:|.||.:|||..|||.|.      ...|
 Frog   130 QRF------SGEELETWNLLTRT-NYNFQHISLRLTVLWGLGMLVRYTFLLPLRV------ALAI 181

  Fly   164 SGVSML------LGHIPDWCFKKKLVELVLRQCFRITAACLPMIRRFHNTEYRPTK-GICVCNHT 221
            :|||:|      :|.:|:..||:.|.:.|...|:||....|..|..:|.:|.||.| ||||.|||
 Frog   182 TGVSLLVIGTTVVGFLPNGRFKEFLSKHVHLMCYRICVRALTAIITYHGSENRPRKGGICVANHT 246

  Fly   222 SPLDVLVLMCDANYSLTGQVHTGILGVLQRALSRVSHHMWFDRKELADREALGLVLRLHCSMKDR 286
            ||:||::|..|..|::.||:|.|::||:|||:.:...|:||:|.|:.||..:...|..|...|.:
 Frog   247 SPIDVIILASDGYYAMVGQIHGGLMGVIQRAMVKSCPHVWFERSEVKDRHLVAKRLTDHVQDKSK 311

  Fly   287 PPVLLFPEGTCINNTAVMQFKKGSFAVSDVVHPVAIRYDRRFGEAYWDSTRYSMLRYMLMVVSSW 351
            .|:|:||||||||||:||.||||||.:...|:||||:||.|||:|:|:|::|.|:.|:|.:::||
 Frog   312 LPILIFPEGTCINNTSVMMFKKGSFEIGATVYPVAIKYDPRFGDAFWNSSKYGMVTYLLRMMTSW 376

  Fly   352 CICCDVWYMPALSRCNDESPVEFSNRVKAAIAAQANIDDLPWDGNLKRWSPVRD 405
            .|.|.|||:|.::|..||..|:|:||||:|||.|..:.||.|||.||| ..|:|
 Frog   377 AIVCSVWYLPPMTRQEDEDAVQFANRVKSAIAHQGGLVDLLWDGGLKR-EKVKD 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15450NP_608409.1 LPLAT_LPCAT1-like 191..399 CDD:153253 106/208 (51%)
gpat4NP_001123822.1 LPLAT_LPCAT1-like 215..424 CDD:153253 106/208 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I2744
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232807at33208
OrthoFinder 1 1.000 - - FOG0001324
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1369
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.060

Return to query results.
Submit another query.