DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shakB and Inx2

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001162684.1 Gene:Inx2 / 31646 FlyBaseID:FBgn0027108 Length:367 Species:Drosophila melanogaster


Alignment Length:353 Identity:175/353 - (49%)
Similarity:256/353 - (72%) Gaps:4/353 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 VSHVKIDSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDCVHTRDIPEDVLNTYCWIHSTYTVV 237
            :..|.||:.|||:|..||||:||.||:.||:|||:|:||||: ..:||..|::|||||:||:||.
  Fly    14 IDQVCIDNNVFRMHYKATVIILIAFSLLVTSRQYIGDPIDCI-VDEIPLGVMDTYCWIYSTFTVP 77

  Fly   238 DAFMKKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLWKSWEGGKIHAL 302
            :......|.:|..||| .|...|...:|:.||||||.|.|||||||||.||:||||||||::..|
  Fly    78 ERLTGITGRDVVQPGV-GSHVEGEDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKSWEGGRLKML 141

  Fly   303 IMDLDIGICSEAEKKQKKKLLLDYLWENLRYHNWWAYRYYVCELLALINVIGQMFLMNRFFDGEF 367
            :|||:..|.::..|..:||:|:||...||..||::|:|::|||.|..:|||||::.::.|.||||
  Fly   142 VMDLNSPIVNDECKNDRKKILVDYFIGNLNRHNFYAFRFFVCEALNFVNVIGQIYFVDFFLDGEF 206

  Fly   368 ITFGLKVIDYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFL 432
            .|:|..|:.:.|.:.::|:|||..:||::|||||.|||.||.|:.||.:|:||||:||||||:||
  Fly   207 STYGSDVLKFTELEPDERIDPMARVFPKVTKCTFHKYGPSGSVQTHDGLCVLPLNIVNEKIYVFL 271

  Fly   433 WFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEIIVRRSKMGDWFLLYLLGEN 497
            |||||:|:.::.::||||:.::..|::|..|.|.|.||...:.:|::..:..:|||||||.||:|
  Fly   272 WFWFIILSIMSGISLIYRIAVVAGPKLRHLLLRARSRLAESEEVELVANKCNIGDWFLLYQLGKN 336

  Fly   498 IDTVIFRDVVQDLANRLGHNQH--HRVP 523
            ||.:|:::|:.||:..:..::|  |:.|
  Fly   337 IDPLIYKEVISDLSREMSGDEHSAHKRP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 170/334 (51%)
Inx2NP_001162684.1 Innexin 1..351 CDD:295599 172/338 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 1 0.900 - - E1_2BWHM
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 1 1.000 - - FOG0003274
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
98.970

Return to query results.
Submit another query.