DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and che-7

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001317771.1 Gene:che-7 / 184979 WormBaseID:WBGene00000488 Length:563 Species:Caenorhabditis elegans


Alignment Length:367 Identity:95/367 - (25%)
Similarity:154/367 - (41%) Gaps:86/367 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 GSQEQQNMEFLRGVYAFMQVSRSSVSHV-KIDSPVFRLHTNATVILLITFSIAVTTRQYVGNPID 212
            |:...|||           .|..|..|. |.|..|.||....|...||..::.|:.:|:.|.|::
 Worm    41 GAMVLQNM-----------FSALSFLHYRKDDDFVDRLSYFYTSSFLIMMAVLVSFKQFGGRPLE 94

  Fly   213 CVHTRDIP-------EDVLNTYCWIHSTYTV-VDAFMKKQGSEVPFPGVHNSQGRGPLTIKHTKY 269
            |.    :|       |.....|||..:||.| :|..:....||..:              :...|
 Worm    95 CW----VPAQFTASWEAYTEMYCWAQNTYWVPIDQDIPVDISEREY--------------RQISY 141

  Fly   270 YQWVAFTLFFQAILFYTPRWLWK--SWEGG-----------------------KIHALIMDLDIG 309
            ||||.|.|..||.|:|.|..:|:  |.:.|                       .|.:|...::..
 Worm   142 YQWVPFFLLLQAFLYYIPCLMWRLMSDKSGIRLNDIVQMATEKENIEPDYRIRTIESLSRHIESA 206

  Fly   310 ICSEAEKKQKKKLLLDYLWE--NLRYHNWWAYRYYVC-ELLALINVIGQMFLMNRFFD-GEFITF 370
            :..:.....:.:..|..:::  |:||:..:....|:. :::.:.|::..:.|:|:|.: .|:..:
 Worm   207 LRYQHTATSRTQYTLHRVFKCFNMRYYESYVTGMYLATKIMYVGNILTNLVLVNKFLETDEYSIY 271

  Fly   371 GLKVIDYMETDQEDRMDPMIYI----FPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIF 431
            ||.|:       .|.:....:|    |||:|.|. |:....|..::|...|:|.:|:.||||:|.
 Worm   272 GLGVL-------RDLLFGRTWIESGNFPRVTLCD-FEVRVLGNNQRHSVQCVLVINIFNEKIFIL 328

  Fly   432 LWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRR 473
            :|.||.||...:.|.::|    .||..|   ..|.|||.|.|
 Worm   329 IWLWFTLLFVASTLDMLY----WFSISM---FHRDRFRFVLR 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 87/336 (26%)
che-7NP_001317771.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 1 0.900 - - E1_2BWHM
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.980

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