DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shakB and unc-7

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001337312.1 Gene:unc-7 / 181608 WormBaseID:WBGene00006747 Length:546 Species:Caenorhabditis elegans


Alignment Length:463 Identity:110/463 - (23%)
Similarity:190/463 - (41%) Gaps:108/463 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 LGRYGPNASIRHGERKIVQPKRVLSRKLKPHLVADTVKQYISRAQRTTKKGSQEQQNMEFLRGVY 163
            :|..|..|...||.:|...|..:|              .|::.|                .|.:|
 Worm   124 VGSAGHGAGQGHGHKKEFGPAMIL--------------YYLASA----------------FRALY 158

  Fly   164 AFMQVSRSSVSHVKIDSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDC---VHTRDIPEDVLN 225
            ..:.           |..|.:|:...|..:|.:|::.|:.:||||.||.|   ....|..|....
 Worm   159 PRLD-----------DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTE 212

  Fly   226 TYCWIHSTYTVVDAFMKKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWL 290
            .|||:.:||.|      ....::| ..:::.:.|      ...|||||.|.|..:|:|||.|..|
 Worm   213 NYCWVQNTYWV------PMQEDIP-REIYSRRNR------QIGYYQWVPFILAIEALLFYVPCIL 264

  Fly   291 WKS---WEGG---------KIHALIMDLDI---GICSEAEKKQKKKLLLDY--------LWENL- 331
            |:.   |..|         ...|.:||.:|   .:.:.|...|.:..|.:.        .:.|| 
 Worm   265 WRGLLYWHSGINLQGLVQMACDARLMDSEIKTRTVYTMARHMQDEVQLTNIDRQGHSRSCFSNLQ 329

  Fly   332 ------RYHNWWAYRYYV-CELLALINVIGQMFLMNRFFDGEFITFGLKVI-DYMETDQEDRMDP 388
                  |:...:....|: .::|...||:.|.||:|.......:.:|..:: |.|...:.::.. 
 Worm   330 LGANCGRHCGCYVTMLYIGIKVLYSANVLLQFFLLNHLLGSNDLAYGFSLLKDLMHAIEWEQTG- 393

  Fly   389 MIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVI 453
               :|||:|.|. |:....|.:.:|...|:|.:|:.||||::||||||:....:|:...:|.::|
 Worm   394 ---MFPRVTLCD-FEVRVLGNIHRHTVQCVLMINMFNEKIFLFLWFWFLTCGIVTVCNTMYWILI 454

  Fly   454 IFSPRMRVYLFRMRFRLV-----RRDAIEIIVRR-----SKMGDWFLLYLL----GENIDTVIFR 504
            :|.|...:...|...|::     :..|.::.:|:     .:....|:|.::    ||.:.:.:..
 Worm   455 MFIPSQGMSFVRKYLRVLPDHPAKPIADDVTLRKFTNNFLRKDGVFMLRMISTHAGELMSSELIL 519

  Fly   505 DVVQDLAN 512
            .:.||..|
 Worm   520 ALWQDFNN 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 98/383 (26%)
unc-7NP_001337312.1 Innexin 163..525 CDD:307154 96/379 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.080

Return to query results.
Submit another query.