DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and inx-2

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_509885.1 Gene:inx-2 / 181318 WormBaseID:WBGene00002124 Length:419 Species:Caenorhabditis elegans


Alignment Length:304 Identity:81/304 - (26%)
Similarity:138/304 - (45%) Gaps:52/304 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 RLHTNATVILLITFSIAVTTRQYVGNPIDCVHTRDIP---EDVLNTYCWIHSTYTVVDAFMKKQG 245
            |::...|..:|:..::|::.:||.|.||.|...|:..   :..::.:|:|.:||.|      ..|
 Worm    30 RVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYVHDFCFIENTYFV------PNG 88

  Fly   246 SEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLWKSWEGGKIHALIMDLDI-- 308
            :||      ..:.||.   :|..||:||...|.|||.:|..|..||..:.......|...|..  
 Worm    89 TEV------TDEARGG---RHINYYRWVPLVLLFQAAMFVLPYHLWNLFHKRTTINLKGSLRFFE 144

  Fly   309 GICSEAEKKQKKKLLLDYLWENL--------RYHNWWA-YRYYVCELLALINVIGQMFLMNRFFD 364
            |...:.|..|..:.....:|..|        :.:.:.| ..|::.:|..::|.|.||.|:..|.|
 Worm   145 GALKKLEPAQACESFAGEIWNRLSDIRNSSNKLYGFQATINYFLLKLGFIVNCILQMVLLKHFLD 209

  Fly   365 GEFITFG---LKVIDYMET-DQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVN 425
            .:...:|   |..:::..| ::||.      ||||:..|. ||..:.|:..:|...||:.||::.
 Worm   210 VDDYFWGFFHLWNVEFKGTAEKEDS------IFPRIVLCD-FKVRNLGQQHQHTVSCIMILNMII 267

  Fly   426 EKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFR 469
            ||:||..:||.|.:..:|...:|:            :.|::.||
 Worm   268 EKLYICFYFWLIFVFVVTTAGMIH------------FAFQILFR 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 81/304 (27%)
inx-2NP_509885.1 Innexin 26..358 CDD:279248 81/304 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 1 0.900 - - E1_2BWHM
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.940

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