DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and inx-3

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_509002.2 Gene:inx-3 / 180866 WormBaseID:WBGene00002125 Length:420 Species:Caenorhabditis elegans


Alignment Length:396 Identity:108/396 - (27%)
Similarity:175/396 - (44%) Gaps:69/396 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 DSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDCVHTRDIP---EDVLNTYCWIHSTYTVVDAF 240
            |..|.||....|..||..|||.|:.:||||:.|.|....:..   |.....||:|.:|:.:    
 Worm    21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFFI---- 81

  Fly   241 MKKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLWKSWE---GGKIHAL 302
              .:.||:| ..|.:.|.      ....|||||...|..||.:||.|.|:|.|..   |....::
 Worm    82 --PERSEIP-GDVEDRQK------AEIGYYQWVPIVLAIQAFMFYLPSWIWSSLYKQCGLDFPSV 137

  Fly   303 IMDLDIGICSEAEKKQK-KKLLLDYLWENL------RYHNWWAYRY-----------YVC-ELLA 348
            |.:.:.....::|.:.| ...|:|::.:.|      .|..::.||:           |:| :|:.
 Worm   138 ISEAEALRSQDSETRTKGVNKLVDFIGDILDTRSKNEYGRFYCYRFGKGLGSMTSMLYICIKLMY 202

  Fly   349 LINVIGQMFLMNRFFDGEFITFGLKVID--YMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVE 411
            |.||..|..::|:|...|...:|.....  |...:.:|.     .:|||:|.|. |.......|.
 Worm   203 LANVFVQFIILNKFLGNETFLWGFHTFADLYAGREWQDS-----GVFPRVTLCD-FSVRKLANVH 261

  Fly   412 KHDAICILPLNVVNEKIYIFLWFWFI---LLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVR- 472
            ::...|:|.:|:.|||||:|:||||:   :.||:..|..|||  :.|......|:..:....|. 
 Worm   262 RYTVQCVLMINMFNEKIYLFIWFWFVFVLITTFINTLCTIYR--LSFDSSRHNYIRSLLSGPVNN 324

  Fly   473 -RDAIEIIVRRSKMG---DWFLLY-LLGENIDTVIFRDVVQDLANRLGHN-QHHR---------- 521
             :|...:|...:..|   |..||. .:.::...::.:::.::|..:.|.| ||:|          
 Worm   325 FKDEKAMIASFANNGLKQDGVLLMRFIDDHAGAMVTKEICEELFKKHGENLQHNRDFHHGHSTKS 389

  Fly   522 -VPGLK 526
             .|||:
 Worm   390 TSPGLE 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 100/370 (27%)
inx-3NP_509002.2 Innexin 21..370 CDD:279248 100/369 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.080

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