DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and inx-6

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_502435.1 Gene:inx-6 / 178231 WormBaseID:WBGene00002128 Length:389 Species:Caenorhabditis elegans


Alignment Length:391 Identity:89/391 - (22%)
Similarity:161/391 - (41%) Gaps:83/391 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 RLHTNATVILLITFSIAVTTRQYVGNPIDCVHTRDIPE---DVLNTYCWIHSTYTV-VD---AFM 241
            ||::..||::|...|..:.:..::|:||.|........   :.:|.||::|.||.| :|   ||.
 Worm    29 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVPLDQQLAFE 93

  Fly   242 KKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLWK---SWEGGKIHALI 303
            :::.::|..                 :|||||.:....||.|||.||::||   ::.|..:.|.:
 Worm    94 EEERTKVSI-----------------QYYQWVPYVFALQAFLFYIPRFIWKAMIAYSGYDLAAAV 141

  Fly   304 MDLDIGICSEAEKKQKKKLLLD--------YLWENLRY------HNWWAYRYYVCELLALINVIG 354
            ..:|.......:|..|.|..|.        |:|:.:|.      .| .|..|.:..:...:|...
 Worm   142 KYVDRFWSENRDKDDKFKTRLAAFEGRPSVYIWDGIRLARKKRSRN-MALFYTLSTVWQAVNAWI 205

  Fly   355 QMFLMNRFFDGEFIT-FGLKVI-------DYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVE 411
            |.:::.:..|....| :|..::       |:..|..          |||:..|.|.: .....|:
 Worm   206 QFYILTQLLDSSIYTLWGPSILGDLLQGNDWQTTGH----------FPRIVHCDFNR-RRPASVQ 259

  Fly   412 KHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFS-----PRMRVYLFR------ 465
            ....:|:|.||:..||::||||||.:.:..::.:.....:..:.:     ..::.||..      
 Worm   260 LDTVLCVLTLNIYYEKLFIFLWFWLVFVAVVSTVNCFKWIYYLCNKTKAQKTIKNYLSTAPIKST 324

  Fly   466 ----MRFRLVRRDAIEIIVRRS-KMGDWFLLYLLGENIDTVIFRDVVQDLANRLGHNQHHRVPGL 525
                ..|..:..|.:.|:.:.: .:||....||      |:..|::.||......:....|.|.:
 Worm   325 ISDDQFFSALGEDGLFIMDQMALNLGDIPASYL------TISMRNICQDFIESEDYIDEERTPFV 383

  Fly   526 K 526
            |
 Worm   384 K 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 86/377 (23%)
inx-6NP_502435.1 Innexin 25..364 CDD:395704 84/369 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 1 0.900 - - E1_2BWHM
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.980

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