DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and inx-8

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_502209.1 Gene:inx-8 / 178101 WormBaseID:WBGene00002130 Length:382 Species:Caenorhabditis elegans


Alignment Length:338 Identity:86/338 - (25%)
Similarity:135/338 - (39%) Gaps:61/338 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 SSVSHV---KIDSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDC----VHTRDIPEDVLNTYC 228
            |..||:   .||.....|....|..|.||.:|..:.:.|||:.::|    .::.|..|...| ||
 Worm     9 SLTSHLGITAIDDASDTLSCLITAFLFITAAILTSAKTYVGSAMECWLPQTYSGDWGEFAEN-YC 72

  Fly   229 WIHSTYTVVDAFMKKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLWKS 293
            ::..||     |..:|.|....|..|..:.|  ||     ||||.:..|....|.|..|::||:.
 Worm    73 FLKDTY-----FYPRQQSMTDIPMYHKERHR--LT-----YYQWSSMYLAVAGIAFMIPKFLWRL 125

  Fly   294 WEGGKIHALIMDLDIG--ICSEAEKKQKKKLL--------------LDYLWENLRYHNWWAYRYY 342
            .:......::...|..  |.:|.|.|:..|:.              ...|:..:|.:    ..|.
 Worm   126 SQSTTDMPVVYFCDTANEIKNETEDKRSAKIKEMARFMRTKITSVHTPSLFSFIRMY----MVYS 186

  Fly   343 VCELLALINVIGQMFLM--------NRFFDGEFITFGLKVIDYMETDQEDRMDPMIYIFPRMTKC 399
            |.::|.|:|.|.|..::        |.|:........|..|.:..|.          :|||:|.|
 Worm   187 VIKILYLVNAIAQFVIIAIFLGQKRNLFWGWTLFMNLLNGITWETTG----------LFPRVTFC 241

  Fly   400 TFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLF 464
            .|.....:|........|::.:|..||||::|.|||.:.|.|.||:...|....|..|   .::.
 Worm   242 DFQVREMAGNNRDETVECVIGINEFNEKIFLFFWFWLVFLVFSTLIAHFYNAAQIVKP---YFIH 303

  Fly   465 RMRFRLVRRDAIE 477
            .:.|.:...|.::
 Worm   304 SLLFAIRDHDIVD 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 82/327 (25%)
inx-8NP_502209.1 Innexin 20..359 CDD:279248 82/327 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.080

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