DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and inx-16

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_491314.1 Gene:inx-16 / 172005 WormBaseID:WBGene00002138 Length:372 Species:Caenorhabditis elegans


Alignment Length:362 Identity:97/362 - (26%)
Similarity:153/362 - (42%) Gaps:89/362 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 DSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDCVHTRDIP---EDVLNTYCWIHSTYTVVDAF 240
            |:.:.||:...|..:||.||:.:..:.|||.|:.|.......   |....:||:|.:||     |
 Worm    22 DTSIDRLNYVVTTSILIAFSLLLFAKNYVGEPMQCWTPNQFAGGWESFAESYCFIENTY-----F 81

  Fly   241 MKKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLW---KSWEGGKIHAL 302
            :..|.|.:  |.....:||..:      |||||.|.|..||:.|..||..|   .|:.|..|..:
 Worm    82 VPMQDSNL--PAAETREGREMI------YYQWVPFLLVIQALFFCVPRAFWIIYPSYSGLTIADM 138

  Fly   303 IMDLDIGICSEAEKKQKKKLLLDYLWENLRYHNWWAYR-----------YYVCELLALINVIGQM 356
            |        :.|.:..|:....|...|.:...||...:           |.|.:||.|:|::.|.
 Worm   139 I--------TAARQNGKQLEGADEALEQVAMINWRTEQQKGHGSRIFNCYLVMKLLILLNIVLQF 195

  Fly   357 FLMNRFFDGEFITFGLKVI-------DYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHD 414
            ||:|.|.:..:..:|..:.       .:.|:..          |||::.|. ......|.:....
 Worm   196 FLLNSFLNTAYTFWGWGIFWDMVNGRHWQESGH----------FPRVSFCD-INVRELGNIHHWS 249

  Fly   415 AICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEII 479
            ..|:|.:|:.||||:|||||||..|...|....:            ::::|      |.|:    
 Worm   250 LQCVLMVNMFNEKIFIFLWFWFAFLLVATAGDFV------------IWVWR------RFDS---- 292

  Fly   480 VRRSKMGDWFLLYLLG-ENID------TVIFRDVVQD 509
              .||:|  |:|.||. |.||      :.::::|::|
 Worm   293 --NSKLG--FILDLLNQEGIDHSPQKASELYKNVLRD 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 97/362 (27%)
inx-16NP_491314.1 Innexin 22..353 CDD:279248 97/362 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 1 0.900 - - E1_2BWHM
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.980

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