DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and inx-15

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_491313.1 Gene:inx-15 / 172004 WormBaseID:WBGene00002137 Length:382 Species:Caenorhabditis elegans


Alignment Length:418 Identity:103/418 - (24%)
Similarity:173/418 - (41%) Gaps:100/418 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 MEFLRGVYAFMQVSRSSVSHVKIDSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDCVHTRDIP 220
            |||:..:.....|.|..      |..:.||:...:..:....::.:....|.|..|.|....:..
 Worm     1 MEFVVNLVTQYTVQRHE------DDFIDRLNFQYSAYVFALSALVIGYHTYFGRAISCWTPAEFK 59

  Fly   221 ---EDVLNTYCWIHSTYTVVDAFMKKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAI 282
               .:....||.|.:||     ::..:...:| |..:..:       |...|||||.|.|.|.|.
 Worm    60 GGWNEYTTDYCLIENTY-----YVPLEDPNMP-PERYREE-------KELSYYQWVQFILVFLAF 111

  Fly   283 LFYTPRWLWKS---WEGGKIHALI-----MD-LDIG--------ICSEAEK---KQKKKLLLDYL 327
            |||.|...|.:   |.|.::.|::     :| .|:|        |.|..:|   :|.:|..:. |
 Worm   112 LFYLPYLYWSTVNWWSGLQVKAVVDVACNLDKTDVGKRNAGIEKIASHLKKYIDRQGRKSPIP-L 175

  Fly   328 WENLRYHNWWAYRYYVCELLALINVIGQMFLMNRF--FD-GEFIT----FGLKVIDYMETDQEDR 385
            ..|:...||.::.|.:.:.|.|:|:|.||||::.|  || .:||:    ||...|          
 Worm   176 IPNIIGRNWVSFNYILTKFLFLVNLIAQMFLIHFFLGFDLDDFISLRVGFGSNWI---------- 230

  Fly   386 MDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYR 450
               ...||||.|.|. |:....|.::|:...|:|.:|::|||:::.|::|.|.|.|||:..|   
 Worm   231 ---ANGIFPRQTMCD-FEIRKKGSIQKYSVQCVLSMNMLNEKVFLALFYWIIALFFLTVWNL--- 288

  Fly   451 VVIIFSPRMRVYLFRMRFRLVRR----------------DAIEIIVR--RSKMGDW--------- 488
                |:.....:....|...|||                :.:.::.|  .:...|:         
 Worm   289 ----FTSFQHFFHASSRKEFVRRMLSAGGHTLTDGGHGEEKVPLVERPDGTYSNDYNRVLSINPD 349

  Fly   489 --FLLYLLGENIDTVIFRDVVQDLANRL 514
              .:|:|:.:|....:.::||..|..:|
 Worm   350 IVVVLHLIAKNAGDNVCQNVVDMLFQKL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 97/393 (25%)
inx-15NP_491313.1 Innexin 18..377 CDD:279248 97/393 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.080

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