DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shakB and inx-12

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_491213.1 Gene:inx-12 / 171944 WormBaseID:WBGene00002134 Length:408 Species:Caenorhabditis elegans


Alignment Length:324 Identity:86/324 - (26%)
Similarity:144/324 - (44%) Gaps:59/324 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 MQVSRSSVSHVKIDSP------VFRLHTNATVILLITFSIAVTTRQYVGNPIDC---VHTRDIPE 221
            |.|.::.:|.|   ||      |.:|:..||.|.|:..|..:|...:||:||||   .:.:....
 Worm     1 MNVIQNLLSAV---SPQPDGDFVDKLNYCATTIGLVLASAFITGWSFVGSPIDCWFPAYYKGWWA 62

  Fly   222 DVLNTYCWIHSTYTVVDAFMKKQGSEVPFPGVHN-----SQGRGPLTIKHTK---YYQWVAFTLF 278
            :....||::.:|:.|..:..|.:.|       :|     :..:...::|.|.   |||||.|.|.
 Worm    63 EYALDYCYVQNTFFVPFSEDKAERS-------YNWEQLVADKQNTTSLKQTNQIGYYQWVPFILA 120

  Fly   279 FQAILFYTPRWLWK---SWEGGKIHALIMDLDIGICSEAE------------------KKQKKKL 322
            .||:|||.|..:|:   ...|..:.:|     ...|:..|                  :|:.:.|
 Worm   121 LQAMLFYFPVVIWRLFYGMAGQNVTSL-----CNTCTATEGNEESRKGTITTIAGYISQKRHRNL 180

  Fly   323 LLDYL--WENLRYHNWWAYRYYVCELLALINVIGQMFLMNRFFDGEFITFGLKVIDYMETDQEDR 385
            ::..|  ::|....:.....|...:.|.||||:.|..|:.|....:...:|.:|...:.:..|  
 Worm   181 IVKQLSGFQNRANGSAVITSYLFMKALFLINVLFQFVLLKRMLGVDSYFWGAEVTSDLWSGNE-- 243

  Fly   386 MDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIY 449
             .|....|||:|.|. ::..:...:.||...|:|.:|:.||||::.||:|...||.:|:...||
 Worm   244 -WPETGNFPRVTMCE-YEVRNLDNIHKHSVQCVLMINMFNEKIFVALWWWLCFLTVVTITNTIY 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 82/311 (26%)
inx-12NP_491213.1 Innexin 18..377 CDD:279248 80/304 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 1 0.900 - - E1_2BWHM
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.980

Return to query results.
Submit another query.