DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and inx-13

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_491212.1 Gene:inx-13 / 171943 WormBaseID:WBGene00002135 Length:385 Species:Caenorhabditis elegans


Alignment Length:410 Identity:94/410 - (22%)
Similarity:168/410 - (40%) Gaps:120/410 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 DSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDCVHTRDIP-------EDVLNTYCWIHSTY-- 234
            |..:.||:...|.:||:.|::.::.:||||.||.|.    ||       |.....||::.:||  
 Worm    17 DDSIDRLNYYWTPMLLVIFALTLSAKQYVGQPIQCW----IPAQFTGAWEQYSENYCFVQNTYFI 77

  Fly   235 ----TVVDAFMKKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLWKSWE 295
                .:.|:.:.::|:|:                   .|||||.|.|..||||||.|...|:   
 Worm    78 SPDKYIPDSEIDREGAEI-------------------GYYQWVPFILGLQAILFYLPSLFWR--- 120

  Fly   296 GGKIHALIMDLDIGIC--------------SEAEKKQKKKLLLDYLWENLRYHNWWA-------- 338
                   :|:.:.|:.              .|..:.:..|....:|:|:|...:.:|        
 Worm   121 -------LMNFNSGVALKKMLFGAKKADRVDEKARNEAAKSTGAHLYESLTLQSRFAKYTSAFTY 178

  Fly   339 ------YRYYVCELLALINVIGQMFLMNRFFDGEFITFGL----KVIDYMETDQEDRMDPMIYIF 393
                  |.|...:.|.|:.::.|..::|.|....:..:||    .:::..|.::...       |
 Worm   179 GGSYLTYLYLFVKFLYLVQIVFQFIILNNFLGTSYTFWGLGILSDILNGREWEESGH-------F 236

  Fly   394 PRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPR 458
            ||:|.|. |:....|...:|...|:|.:|:.|||:|:|||||.:::...|.|.|:.         
 Worm   237 PRVTMCD-FEVRVLGNKHRHTVQCVLMINMFNEKVYVFLWFWLVIVGVATFLNLVN--------- 291

  Fly   459 MRVYLFRMRFRLVRRDAIEIIVR----------------------RSKMGDWFLLYLLGENIDTV 501
               :..::.||..|:..|:..::                      :.|....|:.:|:..|..:|
 Worm   292 ---WTRKLMFRSARKAHIKSYLQIEDNFSDDNSRNGQILDKFVDYKLKSDGVFITHLIDNNGGSV 353

  Fly   502 IFRDVVQDLANRLGHNQHHR 521
            ...||:.|:.:|...::.:|
 Worm   354 FSHDVIVDMWDRFLQDEDNR 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 92/401 (23%)
inx-13NP_491212.1 Innexin 17..366 CDD:279248 92/401 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 1 0.900 - - E1_2BWHM
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.970

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