DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shakB and inx-21

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_491187.2 Gene:inx-21 / 171930 WormBaseID:WBGene00002143 Length:481 Species:Caenorhabditis elegans


Alignment Length:348 Identity:77/348 - (22%)
Similarity:138/348 - (39%) Gaps:95/348 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 IDSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDCVHTRDIPEDVLNTYCWIHSTYTVVDAFMK 242
            ::|...:|..|.|:.:|:...|.:.::...|:||.|    .:|:|      |..|:   ||.|  
 Worm    19 LESGTEKLLHNTTIAILVFLFILLASKPMFGSPIVC----QVPKD------WPSSS---VDYF-- 68

  Fly   243 KQGSEVPFPG----------VHNSQGRGPLTIKHT----KYYQWVAFTLFFQAILFYTPRWLWKS 293
               :::.:.|          :..:.|||.:|:..|    ::|.||.........|...|.:.|| 
 Worm    69 ---TDICYYGQREKVDIQHRISRAGGRGTVTVNLTTGTSEFYMWVPLVPILLVALCLLPAFFWK- 129

  Fly   294 WEGGKIHALIMDLD----IGICS----------------EAEKKQKKKLLLDYLWENLRYHNWW- 337
                     .:.||    :.|.|                |.|..:::||....        |.| 
 Worm   130 ---------FVGLDCFNGMDIVSFLEFYEQTDDPGERLVEMEGWRRRKLAAQL--------NKWI 177

  Fly   338 -AYRYYVCEL--LALINVIGQMF-----------LMNRFFDGEFITFGLKVIDYMETDQEDRMDP 388
             |.|.:.|.|  ..:|.|:.:.|           :.:.|.||.|. :|  ..|.......|.::|
 Worm   178 MAKRNFFCGLSQTMIIYVLMKWFRTILFIAQFWIIADVFGDGNFF-WG--YADLARIANGDSINP 239

  Fly   389 MIYIFPRMTKCTFFKYGSS-----GEVEKHDAI--CILPLNVVNEKIYIFLWFWFILLTFLTLLT 446
            :...|..::.|...:...|     .....|.|:  |:|..|.:|.|.::.|::||:|::|::|.:
 Worm   240 LKGSFTLISGCRVQRLAMSIGFYRSYTNAHSAVARCMLSANFLNAKAFLVLYWWFLLVSFISLCS 304

  Fly   447 LIYRVVIIFSPRMRVYLFRMRFR 469
            .|:..:|:..|:.|.:.|:...|
 Worm   305 AIHYTIILLVPQYRRHEFKSMIR 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 77/347 (22%)
inx-21NP_491187.2 Innexin 20..389 CDD:279248 77/347 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.