DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and inx-22

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_491186.2 Gene:inx-22 / 171929 WormBaseID:WBGene00002144 Length:462 Species:Caenorhabditis elegans


Alignment Length:343 Identity:72/343 - (20%)
Similarity:127/343 - (37%) Gaps:92/343 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 KIDSPVFRLHT----------NATVILLITFSIAVTTRQYVGNPIDCVHTRDIPEDVLN---TYC 228
            |:..|..:||.          ..|:.:||.|...|::....|.||.|:...:.|:...|   .:|
 Worm     8 KLIRPFLQLHEWDNGAERIVHTTTIQILICFGFLVSSNMMFGQPITCLMLPETPDSSANYFHDFC 72

  Fly   229 WIHSTYTVVDAFMKKQGSEVPFPGVHN----SQGRGPLTIKH-------TKYYQWVAFTLFFQAI 282
            :..              .::..|.:||    |..:|.:.|.:       ..||||..|.:|.|..
 Worm    73 FYQ--------------DKLRIPPLHNAVKRSTRQGTMNINNIMPQEVAVTYYQWTPFIIFLQVA 123

  Fly   283 LFYTPRWLWK-----SWEGGKIHALIMDLDIGICSEAEKKQKKKL-------------LLDYLWE 329
            :...|..:||     .:.|....|::..|       |.||:..|:             .|.:|..
 Worm   124 MCLVPALMWKFFGLHYFYGHDFAAIVRSL-------ASKKKDDKMDSSNSNYEVDARETLRWLEH 181

  Fly   330 NLRYH-------------NWWAYRYYVCELLALINVIGQMFLMNRFFDGEFITFGLKVIDYMETD 381
            ..|..             .|..:    ..||...|::.:::.......|..|::.|....|..  
 Worm   182 KKRERFGMHTTMMIYVAMKWMTF----ASLLFQFNLMAKIYASGELLWGVHISYELLNGAYKN-- 240

  Fly   382 QEDRMDPMIY--IFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTL 444
                    :|  :||::..|...:....|.|.:....||||.|.||.|:::||::|:||...:::
 Worm   241 --------VYTGVFPQIVGCNPHRAQLGGVVNEFIMRCILPQNFVNSKVFLFLYWWYILAMLVSI 297

  Fly   445 LTLIYRVVIIFSPRMRVY 462
            .:.:....::|.|:.:.|
 Worm   298 YSAVQFTAMLFLPKYQRY 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 71/341 (21%)
inx-22NP_491186.2 Innexin 20..376 CDD:279248 68/331 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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