DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shakB and inx-19

DIOPT Version :9

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_490983.2 Gene:inx-19 / 171805 WormBaseID:WBGene00002141 Length:454 Species:Caenorhabditis elegans


Alignment Length:348 Identity:87/348 - (25%)
Similarity:154/348 - (44%) Gaps:86/348 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 RGVYAFMQVSRSSVSHVKI---DSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDC---VHTRD 218
            |.::....::||.::.:.:   |..|.||:...|.::|....:.::.:||.|.||:|   .|:|:
 Worm    15 RQMFFHATLARSFINALSVRGDDDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRE 79

  Fly   219 IPEDVLNTYCWIHSTYTVVDAFMKKQGSEVPF----PGVHNSQGRGPLTIKHTKYYQWVAFTLFF 279
            ..|:.:.:||||.:||.            :|.    |..|.::..     |...|||||.|.|..
 Worm    80 SMEEYIESYCWIQNTYW------------IPMYENVPDDHTAREE-----KQIGYYQWVPFILIA 127

  Fly   280 QAILFYTPRWLWK--SWEGG-KIHALIMDLDIGICS-----EAEKKQK--KKLLLDYLWENL--- 331
            :|::|..|...|:  |::.| .|..||.    ..|.     :|..:||  :.:..::: :||   
 Worm   128 EALMFSLPCIFWRLCSFQSGLNIQTLIN----AACDGQALLDASDRQKAVEAITTNFV-DNLDLQ 187

  Fly   332 ------RYHNWWA--------------YRYYVCELLALINVIGQMFLMNRFF-DGEFITFGLKVI 375
                  |...|.|              ..:...:||..:||:.|..::|... ..:|:.||.:|:
 Worm   188 SPNGRIRARGWIARIKFSRFLSGQCLSILHSFTKLLYSMNVVAQFLILNACLKSSDFLFFGFQVL 252

  Fly   376 D-------YMETDQEDRMDPMIYIFPRMTKCTF-FKYGSSGEVEKHDAICILPLNVVNEKIYIFL 432
            :       :.||..          |||:|.|.| .:|  ...:.::...|.|.:|::|||::.||
 Worm   253 NDIWAGRPWTETGH----------FPRVTLCDFEVRY--LANLNRYTVQCALLINIINEKVFAFL 305

  Fly   433 WFWFILLTFLTLLTLIYRVVIIF 455
            |.|:::|..:|..:.||.:...|
 Worm   306 WCWYMILAIITTCSFIYWIANSF 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 179..514 CDD:279248 84/326 (26%)
inx-19NP_490983.2 Innexin 37..414 CDD:279248 84/326 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28980
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.080

Return to query results.
Submit another query.