DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment run and lz

DIOPT Version :10

Sequence 1:NP_523424.2 Gene:run / 33059 FlyBaseID:FBgn0003300 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster


Alignment Length:457 Identity:167/457 - (36%)
Similarity:231/457 - (50%) Gaps:76/457 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PAG---PTMVANNT---------------QVLAAAAAAAAAAAAAVAQGPGPQQSSNATTASAIA 50
            |||   |.||.:::               :.:.|.|.|.........|  |...|:.||.|..:|
  Fly   147 PAGPHPPAMVTSSSTSPTGNGWSSSTGDFKGITAVATATGGGVGGATQ--GATASTGATAAEVLA 209

  Fly    51 INPAQSLANTST------------HSASSTGSSTPDLSTNNTSSSSNATTSPQNSAKMPSSMTDM 103
            ::.:.|:.::|.            ||..:.|.|:...|.||.:.:||:.::..|:  :...:..|
  Fly   210 VSSSASVGSSSPTGGASNGTAHSGHSGHTGGHSSSTASNNNNNGASNSNSNNNNA--VHQDLLWM 272

  Fly   104 FASLHEMLQEYHGELAQTGSPSILCSALPNHWRSNKSLPGAFKVIALDDVPDGTLVSIKCGNDEN 168
            ...:.:..||:.|||.:|.:|..||||||.||||||:||.||||:||.:|.|||.|:|:.|||||
  Fly   273 ERLVQKRQQEHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDEN 337

  Fly   169 YCGELRNCTTTMKNQVAKFNDLRFVGRSGRGKSFTLTITIATYPVQIASYSKAIKVTVDGPREPR 233
            .|.||||.||.|||.||||||||||||||||||||||||:||.|.|:|:|:||||||||||||||
  Fly   338 CCAELRNFTTQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPR 402

  Fly   234 SKQS-YGYPHPGAFNPFMLNPAWLDAAYMTYGYADYFRHQAAAQAAQVHHPALAKSSASSVSPNP 297
            ||.| .|.||..|..  :....::|....|....:....:.:|:.|.|...|.|.::|:|.:   
  Fly   403 SKTSPTGGPHYRALG--LGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAA--- 462

  Fly   298 NPSVATSSSSAVQPSEYPHPAAAVAAAAGQPAAMMPSPPGAAPATPYAIPQFPFN---------- 352
            |...|.:::.||.|:......||...|.|..|.::..     .::.|:.|....|          
  Fly   463 NAVAAAAAAVAVTPTGGGGGVAAGGVAGGAGAGLVQQ-----LSSNYSSPNSTINSDCQVYKPNA 522

  Fly   353 -HVAAA--------------AAAKAATPHAFHPYNFAAAAGLRARNAALHHQSEPVHVSPASSRP 402
             |:.||              :||.....||.||:...|.|.|:      |..:.|....|.::.|
  Fly   523 PHIQAAEMMGAGEWTNGSSSSAAAYYHSHAHHPHAHHAHAHLQ------HQMALPPPPPPPAAAP 581

  Fly   403 SS 404
            .|
  Fly   582 VS 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
runNP_523424.2 Runt 107..235 CDD:459963 92/127 (72%)
lzNP_511099.2 Runt 281..404 CDD:459963 92/122 (75%)

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