DRSC/TRiP Functional Genomics Resources

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Protein Alignment run and LOC1273456

DIOPT Version :10

Sequence 1:NP_523424.2 Gene:run / 33059 FlyBaseID:FBgn0003300 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_061506989.1 Gene:LOC1273456 / 1273456 VectorBaseID:AGAMI1_009727 Length:705 Species:Anopheles gambiae


Alignment Length:714 Identity:200/714 - (28%)
Similarity:262/714 - (36%) Gaps:277/714 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GPGPQQSSNATTASAIAINPAQSLANTSTHSASSTGSSTPDLSTNNTSSSSNATTSPQNSAKMPS 98
            |.|..::..||:.......|..|..|     :..||...|  |.||  ..|:||    :...:|:
Mosquito    32 GTGMLETGTATSGGDAGTQPGGSCRN-----SGGTGVLQP--SQNN--GGSHAT----DDNAIPA 83

  Fly    99 SMTDMFASLHEMLQEYHGELAQTGSPSILCSALPNHWRSNKSLPGAFKVIALDDVPDGTLVSIKC 163
            .:..|...:.|..|:|.|||.:|.||..|||||||||||||:||.|||||:|.||.|||:|:|:.
Mosquito    84 DLRWMERMVMEAEQQYPGELVRTDSPYFLCSALPNHWRSNKTLPSAFKVISLGDVSDGTMVTIRA 148

  Fly   164 GNDENYCGELRNCTTTMKNQVAKFNDLRFVGRSGRGKSFTLTITIATYPVQIASYSKAIKVTVDG 228
            |||||:|.||||||..|:|||||||||||||||||||||||||||.|...|:.:|.|||||||||
Mosquito   149 GNDENFCAELRNCTAVMRNQVAKFNDLRFVGRSGRGKSFTLTITICTTMPQVTTYCKAIKVTVDG 213

  Fly   229 PREPRSKQSYGYPHPGAFNPFMLNPAWLDAAY--------------------------------- 260
            |||||||.:.....|...:.|:..||:....|                                 
Mosquito   214 PREPRSKTNMPQMRPPPLHRFLEQPAFNHHHYPGRPGSFGGTGGSNTGSSSSNNNNNNNGGGLGS 278

  Fly   261 ----------------------MTYGYADYFRHQAAAQAA-----QVHHP--------------- 283
                                  ...|.:....:.|.:...     ..|||               
Mosquito   279 NGLGTGSTGSLGGGGTAGTGHGNGNGKSSSVNYSAVSSTGSTTNLHTHHPHHHHHHHHHGSGGGG 343

  Fly   284 ------ALAKSSASSVSPNPN-------------------------------------------- 298
                  |:..|:.||....||                                            
Mosquito   344 GGGGNMAINTSAESSSDYKPNLAFSDYTSATDWTNGLVGAPSSTSYMNTFSPLQASPPSYVAYDS 408

  Fly   299 ------PSVATSSSSAV----QP-SEY--------PHPAAAVAAAA--------------GQPAA 330
                  |:.:.::|..|    || .:|        |.||..|||.|              ||.||
Mosquito   409 CPMVDHPNYSLTASGVVLDNLQPYQDYYGLSGPPPPPPAPTVAAVAPPTGTSTVQTGPLGGQLAA 473

  Fly   331 ---MMPSPPG---AAPATPYAIPQFP--------------------FNHVAAAAAAKAA------ 363
               ...|..|   .|.||....|.:|                    :||.||||||.|.      
Mosquito   474 GGSSYVSKTGELVEAAATTTTYPSYPHHTQWTNGYHGSYHHHHHHQYNHPAAAAAASAGGCASSL 538

  Fly   364 -----TPHAFHPYNFAAAAGLRARNAALHHQSEPVHVSPA-SSRPSSSSPTQQHVLLKLNTSIET 422
                 :|.:|||.....||                   || ||.|:...|....:..::.:::..
Mosquito   539 AVAAQSPVSFHPPVATVAA-------------------PAPSSVPAPPPPPPMVLCPQMFSTVNQ 584

  Fly   423 SSIHEQSASDG-DSDDEQIDVVKSEFDLD-------KSLDVAPLRMRCDLKAPSA-----MKPLY 474
            :.||......| |..:.......:.|.::       :|:...|:  ...|.|.:|     :...:
Mosquito   585 NQIHVHLHGTGSDKFEHYFGSADNGFTINSFPGPSIRSVASGPI--ASTLHAGTAVDIGGIAGAH 647

  Fly   475 HESGPGAVANSRQPSPETTTKIKSA----------AVQQK------------------TVWRPY 510
            |....|..||      :|.|.:.||          :.||:                  :|||||
Mosquito   648 HHQDSGGGAN------DTLTALLSAHHDDPQHSGGSEQQQQQQQDEGRGEESVSGDPSSVWRPY 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
runNP_523424.2 Runt 107..235 CDD:459963 94/127 (74%)
LOC1273456XP_061506989.1 None

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