DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6v1 and cyp3a4.2

DIOPT Version :9

Sequence 1:NP_001285499.1 Gene:Cyp6v1 / 33056 FlyBaseID:FBgn0031126 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001015786.1 Gene:cyp3a4.2 / 548503 XenbaseID:XB-GENE-971750 Length:504 Species:Xenopus tropicalis


Alignment Length:536 Identity:162/536 - (30%)
Similarity:265/536 - (49%) Gaps:75/536 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TNILLAIVTILTGVF-IWSRRTYVYWQRRRVKFVQPTHLLGNLSRVLRLEESFALQLRR--FYFD 66
            |.||||.:.:|..:: ||   .|.|:::..:....|...:|..           |:.|:  ..||
 Frog    11 TWILLAALLVLILLYGIW---PYGYFKKMGIPGPTPLPFIGTF-----------LEFRKGMVQFD 61

  Fly    67 -ERFRN-EPVVGIYLFHQPALLIRDLQLVRTVLVED-FVSFSNR--FAKCDGRSDKMGALSLFLA 126
             |.|:. ..:.|.|...||.|.|.|..:::|:||:: :.:|:||  |. .:|..:.    ::.:|
 Frog    62 TECFKKYGKMWGTYDGRQPVLAIMDPAIIKTILVKECYTNFTNRRNFG-LNGPFES----AITIA 121

  Fly   127 KQPEWREIRTRLAPAFAGAKLKQMFSLMEEIGCDLEWYLKRLTRDLRRGDAERGAIVSIKDVCDL 191
            :..:|:.||..|:|.|...|||:||.:|::       |...|.::: :|..|:....:.|||...
 Frog   122 EDEQWKRIRNVLSPTFTSGKLKEMFQIMKD-------YSDILVKNI-QGYVEKDEPCATKDVIGA 178

  Fly   192 YNTDMIASIAFGLRSYSLRNTQSEIGSHCQDLFRPN-VRRIIDLFVIFYLPKLVPLLR------- 248
            |:.|:|.|.:|.:...||.........|.:.|.:.. :..::.|.|||  |.|.|:|.       
 Frog   179 YSMDVITSTSFSVNIDSLNKPSDPFVIHMKKLLKTGLLSPLLILVVIF--PFLRPILEGLNLNFV 241

  Fly   249 PKLFTEPHAEFLRRVIQLVIEERERGGDL-RNDLIEMLLTLKKEADLQQDKSHFTHHRDFLAAQA 312
            ||.||    ||....:....|:|::|... |.||:::::..:..........|.......:.||:
 Frog   242 PKDFT----EFFMNAVTSFREKRKKGDHSGRVDLLQLMMDSRTTGGNDLSNKHKALTDAEIMAQS 302

  Fly   313 ASFEVAGIETCSASMSFALYELAKQPLMQSRLRREIREAF---ASNPNGRLTYEAVARMEFLDMV 374
            ..|.|||.||.|.::|:..|.||..|.:|.||..|| ::|   .::|    ||:.:.:||:||||
 Frog   303 VIFIVAGYETTSTALSYLFYNLATHPDVQQRLHEEI-DSFLPDKASP----TYDILMQMEYLDMV 362

  Fly   375 VEETLRKYPIVPLLERECTPINKKRF----YSLRPHAECYTRRGMPVFISNLAIHHDPKYWPDPD 435
            ::||||.:|....|||    ::|:..    .|:        .:|:...|....:..||:|||:|:
 Frog   363 IQETLRLFPPAGRLER----VSKQNVEINGVSI--------PKGIVTLIPAYVLQRDPEYWPEPE 415

  Fly   436 RFDPERFSAANKALQAPMSYMPFGAGPRNCIGMQIGLLQIKLGLVYFLHQHRVEICDRTVERIQF 500
            .|.|||||..|:|...|.:::|||.|||||||::..||.:|:.:|..|....|..|..|:..::|
 Frog   416 EFRPERFSKENRATHTPFTFLPFGDGPRNCIGLRFALLSMKVAIVTLLQNFSVRPCAETLIPMEF 480

  Fly   501 DAKFALLASEQRIYLK 516
             :....|..::.|.||
 Frog   481 -STIGFLQPKKPIVLK 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6v1NP_001285499.1 p450 59..517 CDD:299894 149/481 (31%)
cyp3a4.2NP_001015786.1 p450 39..496 CDD:365848 152/505 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I3174
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.060

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