DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RunxB and RUNX1

DIOPT Version :9

Sequence 1:NP_001259745.1 Gene:RunxB / 33051 FlyBaseID:FBgn0259162 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001745.2 Gene:RUNX1 / 861 HGNCID:10471 Length:480 Species:Homo sapiens


Alignment Length:489 Identity:167/489 - (34%)
Similarity:224/489 - (45%) Gaps:138/489 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 ERTVDVLLAEHPGELVKTGSPHVVCTTLPTHWRSNKTLPIAFKVLALGEVMDGTIVTIRAGNDEN 172
            :|::..:||:||||||:|.||:.:|:.||||||.||||||||||:|||:|.|||:||:.||||||
Human    75 DRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDEN 139

  Fly   173 FCGELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTIVISTNPIQIATYTKAIKVTVDGPREPR 237
            :..||||.||.||||||:||||||||||||||||||||.:.|||.|:|||.:|||:|||||||||
Human   140 YSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPR 204

  Fly   238 SKVRHQGFHPFAFGPQRFGPDPLMAGLPFKLPGFAHHLVGMHSHLHAPDWRAHMALGGRPAAFTA 302
               ||:         |:.........|     .|:..|..:...              |..|...
Human   205 ---RHR---------QKLDDQTKPGSL-----SFSERLSELEQL--------------RRTAMRV 238

  Fly   303 APFFGHHAAAFPT--ASGLRGLSGDSQQHQQQQQQHQLAT------------VGAAHSTTSPEGS 353
            :|   ||.|..|.  ||.....:.:.|...|.|...|:..            :|   |..||...
Human   239 SP---HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLG---SIASPSVH 297

  Fly   354 PTTTTTSG-----TQLSAFVQPPMTSSP-----------PPVTSLQHDNNNNNSNNNNSSSHIDA 402
            |.|..:.|     |.|||.:...::::|           |.:.|:           ::...|...
Human   298 PATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSI-----------SDPRMHYPG 351

  Fly   403 GFESDSISVTGSPRKSLGSPLTHDEEEAEAEAEAEAEAEAEAEEAEVG-GLSRNGGGIQ-----G 461
            .|       |.||     :|:|                      :.:| |:|..|...:     .
Human   352 AF-------TYSP-----TPVT----------------------SGIGIGMSAMGSATRYHTYLP 382

  Fly   462 PLHSESSPGSGGAFTALIQRSGKNPT-ELFGGFAAAGGNHFAPSGHSFNPA--------LAAQLF 517
            |.:..||...||.|.|      .:|: .|:.| |:||...|:..|...:|.        .:....
Human   383 PPYPGSSQAQGGPFQA------SSPSYHLYYG-ASAGSYQFSMVGGERSPPRILPPCTNASTGSA 440

  Fly   518 LQSPLLPQSSQWLYTQLYGSYSDLPWLRNAAAAA 551
            |.:|.||..|.  ..:..||:|:.|  .|.|.:|
Human   441 LLNPSLPNQSD--VVEAEGSHSNSP--TNMAPSA 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RunxBNP_001259745.1 Runt 118..239 CDD:279225 92/120 (77%)
RUNX1NP_001745.2 Runt 81..207 CDD:395684 95/128 (74%)
RunxI 389..480 CDD:400691 26/93 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 212 1.000 Domainoid score I2778
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 1 1.000 - - mtm8468
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
66.010

Return to query results.
Submit another query.