DRSC/TRiP Functional Genomics Resources

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Protein Alignment RunxB and runx2a

DIOPT Version :10

Sequence 1:NP_001259745.1 Gene:RunxB / 33051 FlyBaseID:FBgn0259162 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_998023.1 Gene:runx2a / 405784 ZFINID:ZDB-GENE-040629-3 Length:467 Species:Danio rerio


Alignment Length:394 Identity:142/394 - (36%)
Similarity:197/394 - (50%) Gaps:65/394 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 NNVKTKPVDTSPYLTPENLIERTVDVLLAEHPGELVKTGSPHVVCTTLPTHWRSNKTLPIAFKVL 152
            ::.:.:|....|.|.|.:  .||:..::|:||.|||:|.||:.:|:.||:|||.|||||:||||:
Zfish    42 SDAQPEPNAVVPRLRPHD--NRTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVV 104

  Fly   153 ALGEVMDGTIVTIRAGNDENFCGELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTIVISTNPI 217
            |||:|.|||:||:.||||||:..||||.:||||||||:||||||||||||||||||||.:.|||.
Zfish   105 ALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPP 169

  Fly   218 QIATYTKAIKVTVDGPREPRSKVRHQGF-----HPFAFGP-----------------QRFGPDPL 260
            |:|||.:|||||||||||||   ||:..     .|..|..                 |...|.|.
Zfish   170 QVATYHRAIKVTVDGPREPR---RHRQKLEDPPKPPLFSERLSELERLRQTTMRVAVQTQSPRPS 231

  Fly   261 MAGLPFKL-PGFAHHLVGMHSHLHAPDWR------AHMALGGRPAAFTAAPFFGHHAAAFPTASG 318
            :...|... |.....:........:|.|.      .:::....|:..:..|.....|...||.|.
Zfish   232 LNATPNSFNPQGQTQISDPRQAQSSPPWSYEQPYPPYLSQMTSPSIHSTTPLSSTRATGLPTISD 296

  Fly   319 L-RGLSGDSQ----QHQQQQQQHQLATVGAAHSTTSPEGS---PTTTTTSGTQLSAFVQPPMTSS 375
            : |.|||.|:    ....:|.:.|..::.:...:..|...   |.|.|.:.|.:::.:...|:::
Zfish   297 VPRRLSGTSELSPFSADPRQFERQFPSLSSLTDSRFPSPRMHYPATFTYTPTPVTSGMSLGMSTT 361

  Fly   376 -------PPPVTSLQHDNNNNNSNNNNSSSHIDAGFESDSIS---VTGSPRK-----------SL 419
                   |||...  ...|.:.....:|:.::..|..|.|..   |.|..|.           |.
Zfish   362 THYHTYLPPPYPG--STQNQSGPFQTSSTPYLYYGASSGSYQFPMVPGGDRSPSRMLPPCTSAST 424

  Fly   420 GSPL 423
            ||.|
Zfish   425 GSTL 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RunxBNP_001259745.1 Runt 115..239 CDD:459963 91/123 (74%)
runx2aNP_998023.1 Runt 63..191 CDD:459963 91/130 (70%)
PHA03247 <222..458 CDD:223021 41/209 (20%)
RunxI 376..467 CDD:430037 12/53 (23%)

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