DRSC/TRiP Functional Genomics Resources

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Protein Alignment RunxB and Runx3

DIOPT Version :9

Sequence 1:NP_001259745.1 Gene:RunxB / 33051 FlyBaseID:FBgn0259162 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_062706.2 Gene:Runx3 / 12399 MGIID:102672 Length:423 Species:Mus musculus


Alignment Length:394 Identity:147/394 - (37%)
Similarity:191/394 - (48%) Gaps:71/394 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 PENLIERTVDVLLAEHPGELVKTGSPHVVCTTLPTHWRSNKTLPIAFKVLALGEVMDGTIVTIRA 167
            ||  :...||| ||:|.||||:|.||:.:|:.||:|||.|||||:||||:|||:|.|||:||:.|
Mouse    65 PE--VRSMVDV-LADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMA 126

  Fly   168 GNDENFCGELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTIVISTNPIQIATYTKAIKVTVDG 232
            |||||:..||||.:||||||||:||||||||||||||||||||.:.|||.|:|||.:||||||||
Mouse   127 GNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDG 191

  Fly   233 PREP---RSKVRHQGFHPFAFGPQRFGPDPLMAGLPFKLPGFAHHLVGMHSHLHAPDWRAHMALG 294
            ||||   |.|:..|   ..|| |.||| |..|...|                 ..|..|..::..
Mouse   192 PREPRRHRQKIEDQ---TKAF-PDRFG-DLRMRVTP-----------------STPSPRGSLSTT 234

  Fly   295 GRPAAFTAAPFFG-----------HHAAAFPTASGLRGLSGDSQQHQQQQQQHQLATVGAAHSTT 348
            ...::....|..|           ....:|||...|      ::......:.|....:.||.   
Mouse   235 SHFSSQAQTPIQGSSDLNPFSDPRQFDRSFPTLQSL------TESRFPDPRMHYPGAMSAAF--- 290

  Fly   349 SPEGSPTTTTTSGTQLSAFVQPPMTSS--------PPPVTSLQHDNNNNNSNNNNSSSHIDAGFE 405
                 |.:.|.|||.|.:.....|.:|        |||..... .:.:.....|.:..|:..|..
Mouse   291 -----PYSATPSGTSLGSLSVAGMPASSRFHHTYLPPPYPGAP-QSQSGPFQANPAPYHLFYGAS 349

  Fly   406 SD----SISVTGSPRKSLGSPLTHDEEEAEAEAEAEAEAEAEAEEAEVGGLSRNGGGIQGPLHSE 466
            |.    |::..|...:|....||    ...:.|...|.........:..|:..:|.....|. :.
Mouse   350 SGSYQFSMAAAGGGERSPTRMLT----SCPSGASVSAGNLMNPSLGQADGVEADGSHSNSPT-AL 409

  Fly   467 SSPG 470
            |:||
Mouse   410 STPG 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RunxBNP_001259745.1 Runt 118..239 CDD:279225 90/123 (73%)
Runx3NP_062706.2 Runt 77..198 CDD:279225 89/120 (74%)
RunxI 328..423 CDD:285676 17/92 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 212 1.000 Domainoid score I2765
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 215 1.000 Inparanoid score I3604
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 1 1.000 - - mtm8706
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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