DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1812 and AT1G67480

DIOPT Version :9

Sequence 1:NP_608397.1 Gene:CG1812 / 33049 FlyBaseID:FBgn0031119 Length:616 Species:Drosophila melanogaster
Sequence 2:NP_001077785.1 Gene:AT1G67480 / 843069 AraportID:AT1G67480 Length:376 Species:Arabidopsis thaliana


Alignment Length:326 Identity:67/326 - (20%)
Similarity:115/326 - (35%) Gaps:91/326 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 LKIGGFE--WNGLTNVIMCFSPKKMNWYELTAIPHIDQCNFGTAVLNNKLFIVGGAY----DVFL 366
            :..||.:  |    .|:.|...|..:   |..:|...:..|...|::.||.::.|..    .:..
plant    98 MNAGGKDNRW----EVMDCLGQKLSS---LPPMPGPAKTGFKVVVVDGKLLVIAGCCMINGSLVA 155

  Fly   367 KEYIHPFGFCYCPLRNTWMTIAPIQQDRCRFSLNAVGTQHLYAVGGI-LDDDNEEALRMISNVER 430
            ...::.:..|.    |:|..:|.::..|..|:...| ..|:|.|||. :|.::      :|:.|.
plant   156 SADVYQYDTCL----NSWSRLADLEVARYDFACAEV-NGHVYVVGGHGVDGES------LSSAEV 209

  Fly   431 YDIAKNVWTYMPSLQENRSQHAGVVVGDKLYISGGVHLANILASMWVFDTKTEVWQELASMPTPC 495
            ||.....||::.||:..|..........|||:.||      .::..:.::|              
plant   210 YDPETCTWTFIESLRRPRWGCFASAFNGKLYVMGG------RSNFTIGNSK-------------- 254

  Fly   496 CDHVLVAVDNRIYACGGWHESLTEWRVLVEHI-----------------YAYDIETNTWSVETKI 543
                |:.|.|.  .||.||.|.....::..|:                 ..::.|..||.|   :
plant   255 ----LLDVYNT--QCGSWHGSKNGLTMVTAHVEVGKKLFCIDWKNHRKMSVFNAEDETWEV---V 310

  Fly   544 PAPKFYTGVTAMGRTIFFVGGLDST----ESIDRASAETMAYDLDTKEWWHEKDSWDSPNDVWES 604
            ..|     ::...|..|..|.|...    .|.:.....|:.||.|.           ||...|::
plant   311 ALP-----LSGSSRAGFQFGKLSGKLLLFSSQEETGQCTLLYDPDA-----------SPGTQWKT 359

  Fly   605 T 605
            :
plant   360 S 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1812NP_608397.1 BTB 38..142 CDD:279045
PHA03098 46..588 CDD:222983 64/307 (21%)
BACK 151..249 CDD:285009
KELCH repeat 344..390 CDD:276965 9/49 (18%)
KELCH repeat 394..444 CDD:276965 15/50 (30%)
Kelch 406..458 CDD:128874 15/52 (29%)
Kelch_1 448..492 CDD:279660 7/43 (16%)
KELCH repeat 448..492 CDD:276965 7/43 (16%)
Kelch_1 494..539 CDD:279660 12/61 (20%)
KELCH repeat 495..539 CDD:276965 12/60 (20%)
AT1G67480NP_001077785.1 F-box 38..79 CDD:279040
Kelch_1 129..175 CDD:279660 9/49 (18%)
KELCH repeat 130..175 CDD:276965 9/48 (19%)
Kelch_1 178..224 CDD:279660 16/52 (31%)
KELCH repeat 179..224 CDD:276965 16/51 (31%)
KELCH repeat 227..267 CDD:276965 12/65 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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