DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG1812 and AT1G30090

DIOPT Version :9

Sequence 1:	NP_608397.1	Gene:	CG1812 / 33049	FlyBaseID:	FBgn0031119	Length:	616	Species:	Drosophila melanogaster
Sequence 2:	NP_564347.1	Gene:	AT1G30090 / 839888	AraportID:	AT1G30090	Length:	398	Species:	Arabidopsis thaliana

Alignment Length:	401	Identity:	87/401 - (21%)
Similarity:	134/401 - (33%)	Gaps:	127/401 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly   226 NESALGDLLRLIKWQHISYKSVDELRNMNCSLDKGKQLPLPTSYYNRIKQEHMGHLLNGVVSLKD 290
            ::.||..|||:....|:|.|||       |   |...|...|......|::..|        .||
plant    59 DDVALNCLLRVPVQSHVSSKSV-------C---KRWHLLFGTKETFFAKRKEFG--------FKD 105

  Fly   291 QSLPQGPTNMRGMELCLLKIGGFEWNGLTNVIMCFSPKKMNWYELTAIPHIDQ-CNFGTAVLN-- 352
            ..|     .:.|...|..||   :|..|       ..:.:.|:|:.|:|..|: |..|...::
plant   106 PWL-----FVVGFSRCTGKI---QWKVL-------DLRNLTWHEIPAMPCRDKVCPHGFRSVSMP 155

  Fly   353 --NKLFIVGG-------AYDVFLKEYIHPFGFCYCPLRNTWMTIAPIQQDRCRFSLNAVGTQHLY 408
              ..:|:.||       ..|:.||         |..::|.|.....:...|..|:...:... :|
plant   156 REGTMFVCGGMVSDSDCPLDLVLK---------YDMVKNHWTVTNKMITARSFFASGVIDGM-IY 210

  Fly   409 AVGGILDD----DNEEAL-----------RMISNVERYDIAKN----------VW---------T 439
            |.||...|    |..|.|           .|::::..||.|..          :|         .
plant   211 AAGGNAADLYELDCAEVLNPLDGNWRPVSNMVAHMASYDTAVLNGKLLVTEGWLWPFFVSPRGQV 275

  Fly   440 YMPSLQENRSQHAG---------VVVGDKLYISGGVHLANILASMWVFDTKTEVWQELASMPTP- 494
            |.|...:..:...|         ||:.|:|:|...:.    ...|.|:|..|:.|:.:.....|
plant   276 YDPRTDQWETMSMGLREGWTGTSVVIYDRLFIVSELE----RMKMKVYDPVTDSWETINGPELPE 336

  Fly   495 --CCDHVLVAVDNRIYACGGWHESLTEWRVLVEHIYAYDIETNTWSVETK-------IPAPKFYT 550
              |....:....||:|..|         |.|  |:..    .|.|..|.|       :.:|:.|.
plant   337 QICRPFAVNCYGNRVYVVG---------RNL--HLAV----GNIWQSENKFAVRWEVVESPERYA 386

  Fly   551 GVTAMGRTIFF 561
            .:|.....|.|
plant   387 DITPSNSQILF 397

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1812	NP_608397.1	BTB	38..142	CDD:279045
		PHA03098	46..588	CDD:222983	87/401 (22%)
		BACK	151..249	CDD:285009	10/22 (45%)
		KELCH repeat	344..390	CDD:276965	11/56 (20%)
		KELCH repeat	394..444	CDD:276965	17/83 (20%)
		Kelch	406..458	CDD:128874	18/94 (19%)
		Kelch_1	448..492	CDD:279660	11/52 (21%)
		KELCH repeat	448..492	CDD:276965	11/52 (21%)
		Kelch_1	494..539	CDD:279660	11/47 (23%)
		KELCH repeat	495..539	CDD:276965	10/43 (23%)
AT1G30090	NP_564347.1	F-box	52..95	CDD:279040	14/45 (31%)
		KELCH repeat	147..193	CDD:276965	10/54 (19%)
		Kelch	161..207	CDD:128874	11/54 (20%)
		Kelch_1	196..241	CDD:279660	10/45 (22%)
		KELCH repeat	197..242	CDD:276965	10/45 (22%)
		KELCH repeat	245..287	CDD:276965	6/41 (15%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1072
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	57	1.000	Inparanoid score	I2576
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X9
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.860