DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1812 and klhdc8a

DIOPT Version :9

Sequence 1:NP_608397.1 Gene:CG1812 / 33049 FlyBaseID:FBgn0031119 Length:616 Species:Drosophila melanogaster
Sequence 2:XP_001334194.3 Gene:klhdc8a / 794258 ZFINID:ZDB-GENE-120810-3 Length:354 Species:Danio rerio


Alignment Length:347 Identity:84/347 - (24%)
Similarity:132/347 - (38%) Gaps:96/347 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 LLKIGGFEWNGL-TNVIMCFSPKKMNWYELTAIPHIDQCNFGTAVLNNKLFIVGG---------A 361
            |..:||.:.:|. |:.:..:||:...|..|..:| ..:.....|||..:|.:|||         |
Zfish    33 LYLVGGCDASGQPTSALELYSPEVDRWLSLPPMP-TPRAGAAVAVLGKQLLVVGGMGKEQRPLKA 96

  Fly   362 YDVFLKEYIHPFGFCYCPLRNT----WMTIAPIQQDRCRFSLNAVGTQ------HLYAVGGILDD 416
            .:|:                ||    |       :.||.....::|..      ...||||:..|
Zfish    97 VEVY----------------NTDEGKW-------RKRCSLREASMGVSVTVKDGRALAVGGMGPD 138

  Fly   417 DNEEALRMISNVERYDIAKNVWTYMPSLQENRSQHAGVVVGDKLYISGGVHLANILASMWVFDTK 481
                 |...|.:::||:.|:||..:|::...|...:..::|.|:|::||.....::.:..|||.:
Zfish   139 -----LLPRSVLQQYDLRKDVWALLPAMPTPRYDTSICLLGSKIYVAGGRQCKRLVKAFEVFDME 198

  Fly   482 TEVWQELASMPTPCCDHVLVAV--DNRIYAC-------GGWHESLTEWRVLVEHIYAYDIETNTW 537
            ...|..|.|:|   |......|  |:....|       ||.|:|    ....:::..:|.....|
Zfish   199 NRTWSSLPSLP---CKRSYSGVLWDSAGCLCWLGGLRQGGIHQS----SKFTKNVNIFDTNKGVW 256

  Fly   538 -----SVETKIPAPKFYTGVTAMGRTIFFVGGLDSTESIDRASAETMAYDLDTKEWWH-EKDSWD 596
                 :|..|.....|...: ..||.| ..|||....|:           |||.|.:| ||..|:
Zfish   257 LKSEDTVPLKTKRADFAAAI-VRGRMI-VAGGLGHQPSV-----------LDTVEAFHPEKRKWE 308

  Fly   597 --SPNDVWESTCVAIYVPNCDA 616
              ||          :..|.|.|
Zfish   309 RLSP----------MATPRCSA 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1812NP_608397.1 BTB 38..142 CDD:279045
PHA03098 46..588 CDD:222983 74/314 (24%)
BACK 151..249 CDD:285009
KELCH repeat 344..390 CDD:276965 12/58 (21%)
KELCH repeat 394..444 CDD:276965 16/55 (29%)
Kelch 406..458 CDD:128874 14/51 (27%)
Kelch_1 448..492 CDD:279660 12/43 (28%)
KELCH repeat 448..492 CDD:276965 12/43 (28%)
Kelch_1 494..539 CDD:279660 10/58 (17%)
KELCH repeat 495..539 CDD:276965 10/57 (18%)
klhdc8aXP_001334194.3 KELCH repeat 21..65 CDD:276965 9/31 (29%)
Kelch 32..79 CDD:128874 13/46 (28%)
Kelch_1 68..109 CDD:279660 12/63 (19%)
KELCH repeat 69..162 CDD:276965 28/120 (23%)
mutarot_permut 70..334 CDD:274642 74/309 (24%)
KELCH repeat 119..157 CDD:276965 13/42 (31%)
Kelch 131..171 CDD:128874 14/44 (32%)
KELCH repeat 165..209 CDD:276965 12/43 (28%)
Kelch 176..217 CDD:128874 12/43 (28%)
KELCH repeat 269..315 CDD:276965 18/68 (26%)
Kelch_1 269..313 CDD:279660 18/66 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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