DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1812 and CG9426

DIOPT Version :9

Sequence 1:NP_608397.1 Gene:CG1812 / 33049 FlyBaseID:FBgn0031119 Length:616 Species:Drosophila melanogaster
Sequence 2:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster


Alignment Length:644 Identity:162/644 - (25%)
Similarity:276/644 - (42%) Gaps:109/644 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ATATSAAAKIP--VNPVSPEEETLLRGLNKLRNEEKLTDVTLIVEEHRFKAHRVVLAASSDYFCA 75
            |||.|....:|  .|...|.:  :|..||:||.:.:..||.:|.......|||.||:|:|.||.|
  Fly    48 ATAASHRTNLPSYCNAQYPFK--VLSNLNQLREQSRFCDVEIIAGMATLSAHRAVLSAASAYFEA 110

  Fly    76 MF-ADCAMIESRKDEINLYGIKARAMGSIIDYIYTSMLELNYDNIEEILAAATHVQVREVIDRCT 139
            || .:..:.|.::..:.|:.|....:..::|:|||...|:...|::|:||||..:|:.||:|.|.
  Fly   111 MFRPELGLNEVKQKSVVLHTIDGDILHILLDFIYTGRCEITQSNVQELLAAADMLQLNEVVDGCC 175

  Fly   140 IFLGAKIEMENCLAIAGMADIYGIMDLSERAYRYMCAHFEEFATTSDFKEMKVDQLRFILSSNYP 204
            .||..::...|.|.|...|:.:....|::.|..::.|:|.......:|.|.....|..:|:|   
  Fly   176 EFLCRELHASNALGILRFAEAHNCESLAKSALNFVHANFPAVTLEDEFLETPQTLLSQLLNS--- 237

  Fly   205 IDVAEQDLVRLVCSFAIEQQLNESALG--------------DLLRLIKWQHISYKSVDELRNMNC 255
                  :|:|:    ..|.|:.::||.              |:|..::...:..|.:|:....:|
  Fly   238 ------ELLRV----DSESQVFQAALRWIKHDVTQRRCYVFDVLSHVRMALVPVKVIDKALKDDC 292

  Fly   256 SLDKGKQLPLPTSYYNRIKQEHMGHLLNGVVSLKDQSLPQGPTNMRGMELC---LLK-----IGG 312
            . |...::.|.:             :...:.|.:.|.:|        :.:|   |.|     |||
  Fly   293 R-DMSVKIALRS-------------ICRDIASKRGQLVP--------LRVCPRQLAKKNIYIIGG 335

  Fly   313 FE------WNG---LTNVIMCFSPKKMNWYELTAIPHIDQCNFGTAVLNNKLFIVGGAYDVFLKE 368
            ..      ||.   :...:..|...:..|.| ||...:.:...|.:.||.|:::|||...    .
  Fly   336 SHRDTPRTWNSADCIFETVAKFDIFRREWTE-TAPMEVGRILPGVSALNGKIYVVGGERG----S 395

  Fly   369 YIHPFGFCYCPLRNTWMTIAPIQQDRCRFSLNAVGTQHLYAVGGILDDDNEEALRMISNVERYDI 433
            .|...|..|.|..:.|..|||:...||.|.|..:| .:|:||||.:.||      :..::|.||.
  Fly   396 QILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMG-GNLFAVGGWIGDD------IGGSMECYDP 453

  Fly   434 AKNVWTYMPSLQENRSQHAGVVVGDKLYISGGV-----HLANILASMWVFDTKTEVWQELASMPT 493
            .:::|..|.|:.:.|.....|.....:||.||.     ||.::::    |:..|:.|.|||.|.|
  Fly   454 EQDLWKLMGSMPQPRFSMGVVSFEGLIYIVGGCTTTTRHLPDLIS----FNPVTKEWNELARMQT 514

  Fly   494 PCCDHVLVAVDNRIYACGGWHESLTEWRVLVEHIYAYDIETNTWSVETKIPAPKFYTGVTAMGRT 558
            ..|...:..:|..:|..||  .|:::  .::..:..|..:.:.|:....:..|:....|.|....
  Fly   515 ARCQMGVAVLDRYLYVVGG--SSISQ--DILSSVERYSFDEDKWTTVCALNVPRAIPAVVAADGL 575

  Fly   559 IFFVGGLDSTE-SIDRASAETMAYDLDTKEWWHEKDSWDSPNDVWESTCVAIYVPNCDA 616
            ::..||....| :..||.....|.           :.:|..:|.|:: |..:.|...:|
  Fly   576 LYVAGGDQPCEVNFYRAQVTINAV-----------ECYDPLSDTWKN-CPDLPVSRSEA 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1812NP_608397.1 BTB 38..142 CDD:279045 38/104 (37%)
PHA03098 46..588 CDD:222983 144/579 (25%)
BACK 151..249 CDD:285009 21/111 (19%)
KELCH repeat 344..390 CDD:276965 14/45 (31%)
KELCH repeat 394..444 CDD:276965 17/49 (35%)
Kelch 406..458 CDD:128874 15/51 (29%)
Kelch_1 448..492 CDD:279660 14/48 (29%)
KELCH repeat 448..492 CDD:276965 14/48 (29%)
Kelch_1 494..539 CDD:279660 8/44 (18%)
KELCH repeat 495..539 CDD:276965 8/43 (19%)
CG9426NP_609616.1 BTB 73..179 CDD:279045 39/105 (37%)
PHA03098 78..558 CDD:222983 135/534 (25%)
BACK 187..289 CDD:285009 22/114 (19%)
Kelch 330..384 CDD:128874 12/54 (22%)
KELCH repeat 374..417 CDD:276965 14/46 (30%)
Kelch 385..431 CDD:128874 17/50 (34%)
KELCH repeat 421..465 CDD:276965 18/50 (36%)
Kelch <447..478 CDD:128874 8/30 (27%)
Kelch_6 467..516 CDD:290672 16/52 (31%)
KELCH repeat 468..512 CDD:276965 14/47 (30%)
Kelch_1 515..557 CDD:279660 8/45 (18%)
KELCH repeat 516..561 CDD:276965 8/48 (17%)
KELCH repeat 564..617 CDD:276965 12/64 (19%)
Kelch 575..627 CDD:128874 12/60 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I4252
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
43.960

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