DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1812 and Klhl29

DIOPT Version :10

Sequence 1:NP_608397.1 Gene:CG1812 / 33049 FlyBaseID:FBgn0031119 Length:616 Species:Drosophila melanogaster
Sequence 2:XP_038967847.1 Gene:Klhl29 / 298867 RGDID:1311076 Length:951 Species:Rattus norvegicus


Alignment Length:663 Identity:148/663 - (22%)
Similarity:252/663 - (38%) Gaps:176/663 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ATPAPAVTPAATATSAAAKIPV------NPVSPEEETLLRGLNKLRNEEKLTDVTLIVEEHRFKA 61
            ||..|..|.:|........|.|      :|..|:|  :|:.||:.|..:..||:.::||...|:.
  Rat   356 ATNGPPTTDSAHGLQMLRTIGVGKYEFTDPGHPKE--MLKELNQQRRAKAFTDLKIVVEGREFEV 418

  Fly    62 HRVVLAASSDYFCAMF----ADCAMIESRKDEINLYGIKARAMGSIIDYIYTSMLELNYDNIEEI 122
            |:.|||:.|.||..:.    .|.:.....|.|:.|..::|..:..:::::||..|.::..|.:.:
  Rat   419 HQNVLASCSLYFKDLIQRSVQDGSQGSREKLELVLSNLQADVLELLLEFVYTGSLVIDSANAKTL 483

  Fly   123 LAAATHVQVREVIDRCTIFLGAKIEMENCLAIAGMADIYGIMDLSERAYRYMCAHFEEFATTSDF 187
            |.||:..|.......|..||..::...|||.:..||:.....:|...|..:....|.|.|...: 
  Rat   484 LEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEE- 547

  Fly   188 KEMKVDQLRFILSSNYPIDVAEQDLVRLVCSFAIEQQLNESALGDLLRLIK-------------- 238
                      |||      :::.|.:..|.:.::..:..|.....:::.||              
  Rat   548 ----------ILS------ISKDDFIAYVSNDSLNTKAEELVYETVIKWIKKDPATRAQYAAELL 596

  Fly   239 ------WQHISY-----------KSVDELRNMNCSLDKGKQLPLPTSYYNRIKQEHMGHLLNGVV 286
                  :.|.||           ||.:..|::                .|..|:.||        
  Rat   597 AAVRLPFIHPSYLLNVVDNEELIKSSEACRDL----------------VNEAKRYHM-------- 637

  Fly   287 SLKDQSLPQGPTNMR----------GMELCLLKIGGFEWNGLTN----VIMCFSPKKMNWYELTA 337
                  ||.....|:          |:...::.:||.:..|:|.    .:.|::|:...||.|.:
  Rat   638 ------LPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLAS 696

  Fly   338 IPHIDQCNFGTAVLNNKLFIVGGAYD-VFLKEYIHPFGFCYCPLRNTWMTIAPIQQDRCRFSLNA 401
            :|..|:..|......:.:::.||... |.|.:.     :||..|.:.|..::.:...|||.: :.
  Rat   697 LPFYDREFFSVVSAGDNIYLSGGMESGVTLADV-----WCYMSLLDNWNLVSRMTVPRCRHN-SL 755

  Fly   402 VGTQHLYAVGGILDDDNEEALRMISNVERYDIAKNVWTYMPSLQENRSQHAGVVVGDKLYISGGV 466
            |....:|.:||:....|      :.:|||||...|.|..:..|.:.....|..|.|.|:|:.|||
  Rat   756 VYDGKIYTLGGLGVAGN------VDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKIYVFGGV 814

  Fly   467 H----LANILASMWVFDTKTEVWQELASMPTPCCDH-------------VL-------------- 500
            :    .|.:|.|   :..:|..|..:.|   |..|:             :|              
  Rat   815 NEAGRAAGVLQS---YVPQTNTWSFIES---PMIDNKYAPAVTLNGFVFILGGAYARATTIYDPE 873

  Fly   501 -------------------VAVDNRIYACGGWHESLTEWRVLVEHIYAYDIETNTWSVETKIPAP 546
                               |.:|.:|||.||...|  |...| .::.||:..||||::...:|.|
  Rat   874 KGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSS--EGPAL-GNMEAYEPTTNTWTLLPHMPCP 935

  Fly   547 KFYTGVTAMGRTI 559
            .|..|...:.:.|
  Rat   936 VFRHGCVVIKKYI 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1812NP_608397.1 BTB_POZ 33..151 CDD:453885 32/121 (26%)
PHA03098 46..588 CDD:222983 134/614 (22%)
KELCH repeat 344..390 CDD:276965 9/46 (20%)
KELCH repeat 394..444 CDD:276965 15/49 (31%)
KELCH repeat 448..492 CDD:276965 14/47 (30%)
KELCH repeat 495..539 CDD:276965 18/89 (20%)
Klhl29XP_038967847.1 PHA03247 <98..366 CDD:223021 4/9 (44%)
BTB_POZ 388..514 CDD:453885 36/127 (28%)
PHA03098 409..936 CDD:222983 128/594 (22%)
BACK_KLHL29_KBTBD9 508..609 CDD:350543 20/117 (17%)
KELCH repeat 653..697 CDD:276965 10/43 (23%)
KELCH repeat 702..745 CDD:276965 9/47 (19%)
KELCH repeat 749..792 CDD:276965 15/49 (31%)
KELCH repeat 796..884 CDD:276965 17/93 (18%)
KELCH repeat 887..933 CDD:276965 16/48 (33%)

Return to query results.
Submit another query.