DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1812 and spe-26

DIOPT Version :9

Sequence 1:NP_608397.1 Gene:CG1812 / 33049 FlyBaseID:FBgn0031119 Length:616 Species:Drosophila melanogaster
Sequence 2:NP_501919.1 Gene:spe-26 / 177929 WormBaseID:WBGene00004972 Length:570 Species:Caenorhabditis elegans


Alignment Length:556 Identity:106/556 - (19%)
Similarity:193/556 - (34%) Gaps:147/556 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TSAAAKIPVNPVSPEEETLLRGLNKLRNEEKLTDVTLIVEEHRFKA------HRVVLAASSDYFC 74
            ||...:..|..:|.:||         |.|.||.:..:..|.:|..|      .:.:|...:....
 Worm     9 TSIDNRCDVAIISKDEE---------RFEVKLVESEIARELNRLGALSPRSMQKNILVPFTTQTV 64

  Fly    75 AMFADCAMIESRKDEINLYGIKARAMGSII---DYIYTSMLELNYDNIEEILAAATHVQVREVID 136
            ........:....||:..:||: :::..|.   .:.:..:||:.....:.||:..:.|       
 Worm    65 KYLLGLEKVSDSTDEMGWFGIE-KSLEEIAGFGQHCFPKILEMKNTICDHILSTLSDV------- 121

  Fly   137 RCTIFLGAKIEMENCLAIAGMADIYGIMDLSERAYRYMCAHFEEFATTS-----DFKEMKVDQLR 196
                         ||..:......:...:.:.:...|:..:........     :|..:.|::::
 Worm   122 -------------NCFLLHKKFREFDCQNHAHKTLEYILYNLARMVVVDKRVDVEFYRLPVEEVK 173

  Fly   197 FILSSNYPIDVAEQDLVRLVCSFAIEQQLNESALGDLLRLI-KWQHISYKSVDELRNMNCSLDKG 260
            .:|||                     :::|......::.:| :|....:::.|:.|.|  .:...
 Worm   174 HLLSS---------------------EEVNVEQETQIIEVINQWIAADFENRDKFRPM--LMSTV 215

  Fly   261 KQLPLPTSYYNRIKQEHMGHLLNGVVSLKDQSLPQGPTNMRGMELCLLKIGGFEWNGLTNVIMCF 325
            :.|.|.......:.|.|        .|||.         .|.....|:.|||:......:.|..|
 Worm   216 RFLALDQQIAKSLSQFH--------PSLKP---------ARRTRDVLIIIGGWLHRQACDRIEWF 263

  Fly   326 SPKKMNW------YELTAIPHIDQCNFGTAVLNNKLFIVGGAYDVFLKEYIHPFGFCYCPLRNTW 384
            .|:...|      ...|...|      |:|:::..|::.||:.....:          |   .||
 Worm   264 DPENNCWKVSQQKLPTTLAYH------GSAIVDGILYLFGGSTGQRTR----------C---ETW 309

  Fly   385 -MTIAPIQQDRCRFSL---------NAVGTQHLYAVGGILDDDNEEALRMISNV-------ERYD 432
             ::....|.|||...:         :.|....:|..||       :..|.|:..       |.:|
 Worm   310 KLSTETWQWDRCNNMMEPRNYISNSSVVYDGRIYVFGG-------QNFREITRTAVRSRTGEVFD 367

  Fly   433 IAKNVWTYMPSLQENRSQHAGVVVGDKLYISGGVHLANILASMWVFDTKTEVWQELASMPTPCCD 497
            ...|.||...||.:.||..|..|..:::|:|||.:...||||:.|::....|:.....:|.|...
 Worm   368 PKTNKWTETASLSDMRSDCAAEVFENQIYVSGGFNGDMILASVEVYNPIGNVFSRTVDLPYPITG 432

  Fly   498 HVLVAVDNRIYACGG------------WHESLTEWR 521
            |.|:...|::...||            ||.: .||:
 Worm   433 HCLLNHGNQLLIVGGFDGAERQNKIWMWHRT-GEWQ 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1812NP_608397.1 BTB 38..142 CDD:279045 18/112 (16%)
PHA03098 46..588 CDD:222983 98/526 (19%)
BACK 151..249 CDD:285009 10/103 (10%)
KELCH repeat 344..390 CDD:276965 8/46 (17%)
KELCH repeat 394..444 CDD:276965 13/65 (20%)
Kelch 406..458 CDD:128874 16/58 (28%)
Kelch_1 448..492 CDD:279660 14/43 (33%)
KELCH repeat 448..492 CDD:276965 14/43 (33%)
Kelch_1 494..539 CDD:279660 10/40 (25%)
KELCH repeat 495..539 CDD:276965 9/39 (23%)
spe-26NP_501919.1 BACK 131..223 CDD:197943 14/114 (12%)
Kelch 244..291 CDD:128874 12/52 (23%)
Kelch_1 282..325 CDD:279660 13/61 (21%)
KELCH repeat 282..324 CDD:276965 13/60 (22%)
KELCH repeat 328..380 CDD:276965 12/58 (21%)
Kelch 341..393 CDD:128874 16/58 (28%)
KELCH repeat 383..428 CDD:276965 14/44 (32%)
Kelch 394..440 CDD:128874 14/45 (31%)
KELCH repeat 430..471 CDD:276965 9/39 (23%)
Kelch 441..487 CDD:128874 6/28 (21%)
KELCH repeat 477..522 CDD:276965
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45416
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.