DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1812 and klhdc8b

DIOPT Version :9

Sequence 1:NP_608397.1 Gene:CG1812 / 33049 FlyBaseID:FBgn0031119 Length:616 Species:Drosophila melanogaster
Sequence 2:XP_031757044.1 Gene:klhdc8b / 100488297 XenbaseID:XB-GENE-950279 Length:359 Species:Xenopus tropicalis


Alignment Length:232 Identity:53/232 - (22%)
Similarity:82/232 - (35%) Gaps:62/232 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 WMTIAPIQQDRCR-FSLNAVGTQHLYAVGGILDDDNEEALRMISNVERYDIAKNVWTYMPSLQEN 447
            |....|:  ..|| :...|....|||.:||.    ::..| .:..||..|:....||.:|.|...
 Frog    16 WEVFPPM--PTCRVYCTPAYQDGHLYVMGGC----SKTGL-PLDAVEMLDVVSQTWTVLPPLPTA 73

  Fly   448 RSQHAGVVVGDKLYISGG----------VHLANILASMW-------------------------- 476
            |:..|.|.:|.:|.:.||          |.:.|.....|                          
 Frog    74 RAGAAAVALGKQLLVIGGMNSEQCPLATVEIYNSDEGKWEKKDSLCQPSMGISAIENEGKIYALG 138

  Fly   477 -------------VFDTKTEVWQELASMPTPCCDHVLVAVDNRIYACGGWHESLTEWRVLVEHIY 528
                         |::...::|.:|.|||||..........|:||..||     .:.::.|....
 Frog   139 GMAADTSPQALVRVYEPAKDIWLQLPSMPTPRYGASTFLRGNKIYVLGG-----RQGKLPVTAFE 198

  Fly   529 AYDIETNTWSVETKIPAPKFYTGVTAMGRTIFFVGGL 565
            |.|:|..:|:....||:.:.:...|......|.:|||
 Frog   199 ALDLEMKSWTRYPSIPSRRAFASCTMTDNCFFSLGGL 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1812NP_608397.1 BTB 38..142 CDD:279045
PHA03098 46..588 CDD:222983 53/232 (23%)
BACK 151..249 CDD:285009
KELCH repeat 344..390 CDD:276965 1/5 (20%)
KELCH repeat 394..444 CDD:276965 15/50 (30%)
Kelch 406..458 CDD:128874 16/51 (31%)
Kelch_1 448..492 CDD:279660 14/92 (15%)
KELCH repeat 448..492 CDD:276965 14/92 (15%)
Kelch_1 494..539 CDD:279660 11/44 (25%)
KELCH repeat 495..539 CDD:276965 10/43 (23%)
klhdc8bXP_031757044.1 PHA03098 <16..208 CDD:222983 45/203 (22%)
KELCH repeat 26..70 CDD:276965 14/48 (29%)
KELCH repeat 122..167 CDD:276965 4/44 (9%)
KELCH repeat 170..215 CDD:276965 11/49 (22%)
PHA03098 <203..>342 CDD:222983 9/33 (27%)
KELCH repeat 217..264 CDD:276965 5/19 (26%)
KELCH repeat 276..322 CDD:276965
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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