DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1812 and si:ch73-29c22.1

DIOPT Version :9

Sequence 1:NP_608397.1 Gene:CG1812 / 33049 FlyBaseID:FBgn0031119 Length:616 Species:Drosophila melanogaster
Sequence 2:XP_021324659.1 Gene:si:ch73-29c22.1 / 100332572 ZFINID:ZDB-GENE-091204-309 Length:325 Species:Danio rerio


Alignment Length:297 Identity:69/297 - (23%)
Similarity:114/297 - (38%) Gaps:51/297 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 IGGFEWNGLTNVIMCFSPKKMNWYELTAIPHIDQCNFGTAVLNNKLFIVGGAYDVFLKEYIHPFG 374
            :||:..:..:..:..|..:...| :.||.....:.:.|...|:..::.|||:.||.....:..  
Zfish    45 VGGWSKDDPSCPVEQFCSQYNEW-KFTAPMLHPRSDTGVCALDGDIYTVGGSDDVTCLSSVER-- 106

  Fly   375 FCYCPLRNTWMTIAP-----------IQQDRCRFSLNAVGTQHLYAVGGILDDDNEEALRMISNV 428
              |.|..|||....|           ::.|.|           |..:||.      :.:..|:.|
Zfish   107 --YHPESNTWTVDVPSLSSPRSRVCVLEMDGC-----------LITLGGF------DGMTCINTV 152

  Fly   429 ERYDIAKNVWTYMPSLQENRSQHAGVVVGDKLYISGGVHLANILASMWVFDTKTEVWQELASMPT 493
            ||||..||.|:.:..:..||:..:..|:..::|:.||......|.|:..||.....|....:|.|
Zfish   153 ERYDPLKNSWSKLTPMLRNRAAASAAVLNGQIYVVGGTDGDMALDSVERFDPFEGCWSLCPTMST 217

  Fly   494 P-----CCDHVLVAVDNRIYACGGWHESLTEWRVLVEHIYAYDIETNTWSVETKIPAPKFYTGVT 553
            |     |.  |.:..   :|..||    ..|..:.:.::..||.:...||....:...:|...:.
Zfish   218 PREASGCA--VFLGC---LYVAGG----RDELGLSLSNVERYDPDNFRWSPVRAMNNKRFQVSLV 273

  Fly   554 AMGRTIFFVGGLDSTESIDRASAETMAYDLDTKEWWH 590
            .....:..:||.|...  |..:.|  |||.:|..|.|
Zfish   274 VFNDFLLAIGGSDGVS--DHKTME--AYDYETNSWRH 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1812NP_608397.1 BTB 38..142 CDD:279045
PHA03098 46..588 CDD:222983 67/293 (23%)
BACK 151..249 CDD:285009
KELCH repeat 344..390 CDD:276965 13/56 (23%)
KELCH repeat 394..444 CDD:276965 13/49 (27%)
Kelch 406..458 CDD:128874 15/51 (29%)
Kelch_1 448..492 CDD:279660 10/43 (23%)
KELCH repeat 448..492 CDD:276965 10/43 (23%)
Kelch_1 494..539 CDD:279660 10/49 (20%)
KELCH repeat 495..539 CDD:276965 9/43 (21%)
si:ch73-29c22.1XP_021324659.1 Kelch 42..87 CDD:128874 8/42 (19%)
BTB <75..308 CDD:333434 63/266 (24%)
KELCH repeat 77..121 CDD:276965 13/47 (28%)
KELCH repeat 125..169 CDD:276965 14/60 (23%)
KELCH repeat 172..217 CDD:276965 11/44 (25%)
KELCH repeat 219..264 CDD:276965 10/53 (19%)
KELCH repeat 267..312 CDD:276965 12/44 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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