DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP19D and Arhgap12

DIOPT Version :10

Sequence 1:NP_001285496.1 Gene:RhoGAP19D / 33048 FlyBaseID:FBgn0031118 Length:2206 Species:Drosophila melanogaster
Sequence 2:XP_006526377.1 Gene:Arhgap12 / 75415 MGIID:1922665 Length:843 Species:Mus musculus


Alignment Length:876 Identity:188/876 - (21%)
Similarity:309/876 - (35%) Gaps:264/876 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   704 KATLANATIDPV------PVGSSKFVT---LPDKPDKGSSVATLADIAESSAAAIVDSASGSGNV 759
            |.....|.:.||      |..|.|.:.   |....:..:.:..|:...:.|:     |..|:| :
Mouse    68 KEVTRKALMPPVKQATGLPNNSMKTIQSMHLQRSTENVNKMPELSSFGKPSS-----SVQGTG-L 126

  Fly   760 VRRYKPLSSSSFDEGKPMRRISYLRATNNETDFNAEAAA-------------------------- 798
            :|.......|:::.|:.: .:| |..|:|...||:::.:                          
Mouse   127 IRDANQNFGSNYNSGQTL-NLS-LDLTHNNGKFNSDSHSPKVSSQNRTRLFGHFPGPEFLDIEKT 189

  Fly   799 ------GGDAAATGA--------SG-PASASAASSAPGPTPSSAPAP-APAPA------------ 835
                  ..|:|..|:        || ..|:|:.......||.:...| :|..|            
Mouse   190 SFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQMRATTPPNQGRPDSPVYANLQELKISQSAL 254

  Fly   836 -PLPISIPIPVAAVVEPQKTKSLVEEHPDPTYDVIGGTGGGHEFIETPNGLEDVRLSAHGSRRAS 899
             |||.|..|.|....|..|..|                  |..:.......|........:|..|
Mouse   255 PPLPGSPAIQVNGEWETHKDSS------------------GRCYYYNRTTQERTWKPPRWARDVS 301

  Fly   900 MSSDMRSSIHIDAELNGKYVPNELEAFETEIEIKSSCI---NGKRMSEYRSWRQVKLEIKGDLLR 961
            .|.|.:|             |.|.|...:|....|||.   :.:..|..|.|.:           
Mouse   302 TSRDFQS-------------PGEQEPLSSEENYHSSCFSQSDSQCGSPPRGWSE----------- 342

  Fly   962 IYSGRHAKSEHNVIELDIRNFKFFDESMDKKKYLIRMQSKPSPSGAHLASLGNELNLDEGHDKLL 1026
                          |||.|....:.....|:|:|..:.                   |:|.....
Mouse   343 --------------ELDERGHTLYTSDYTKEKWLKHVD-------------------DQGRQYYY 374

  Fly  1027 TSSGSSSANE-PAANAASALTASTSSSTCSSGPYTEILFKTKSSNEMKRLFGLLQW--------- 1081
            ::.||.|..| |..||             ||....||:........::....|.:|         
Mouse   375 SADGSRSEWELPKYNA-------------SSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDS 426

  Fly  1082 --KDS-----LNYDDNEHQPQGKQLAEPQKTV--------------------------------- 1106
              |||     |...:||..|...:..:|..::                                 
Mouse   427 NDKDSPTTTKLCLPENESPPTSSKHQDPAGSLKGQEKYGLLNVTKITENGKKVRKNWLSSWAVLQ 491

  Fly  1107 ASASYLDDVQGGASAADSSPLSSH------SGGI-----ADASGSHHVSAL---PAAAAIVAATS 1157
            .|:......||.:::...|..|..      .|.:     .|.|...:|..|   .....::.:.:
Mouse   492 GSSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGAVIEMASKDKSSKKNVFELKTRQGTELLIQSDN 556

  Fly  1158 DS-ISPVMKARKSSSHKHIPDKDLG-------SP------KSKNWKDLLFRRGGSGSGGVSHHDL 1208
            |: |:...|...|:.:..:.:.|..       ||      |.|:.|:|...|...||...|....
Mouse   557 DAVINDWFKVLSSTINNQVAEADEAAEEETPDSPGVEKHDKEKDQKELKKLRSMKGSSMDSSEQK 621

  Fly  1209 AS-----------PSACAAKQIGSI-----GVPLRS-CPMSKVNAYVPHLVEVCTNIVETKGLGV 1256
            .:           |:..|.::.|.|     |..|.: |  .:.|..||..|::|...||..||.|
Mouse   622 KTKKNLKKFLTRRPTLQAVREKGYIKDQVFGSNLANLC--QRENGTVPKFVKLCIEHVEEHGLDV 684

  Fly  1257 VGIYRIPGNKAAISELSELVNTKDFQFESCASDDRWEDVNVVSSLLKLFIRSLPDALMPASYYIN 1321
            .||||:.||.|.|.:|...|| .|.:.:  .:|.:|||::|::..||:|.|.||:.|...:::.:
Mouse   685 DGIYRVSGNLAVIQKLRFAVN-HDEKLD--LNDSKWEDIHVITGALKMFFRELPEPLFTFNHFND 746

  Fly  1322 FIEADKKFGLERIVLLREIVESLPRHPYETMKHLIRHLCRVSGNCDVNRMEPKNLAIIFGPSIIR 1386
            |:.|.|:...:|:..:::::..||:...:||:.|.|||.||..|.:.|||..:::||:|||::::
Mouse   747 FVNAIKQEPRQRVTAVKDLIRQLPKPNQDTMQILFRHLKRVIENGEKNRMTYQSIAIVFGPTLLK 811

  Fly  1387 TPNDTLETAVKDMKHQCRIVELLVTQYDYFF 1417
            ...:|...||..: :|.:||||::.:....|
Mouse   812 PERETGNIAVHTV-YQNQIVELILLELSTVF 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP19DNP_001285496.1 PDZ_canonical 52..204 CDD:483948
RhoGAP_ARHGAP21 1221..1417 CDD:239860 69/201 (34%)
Arhgap12XP_006526377.1 SH3_ARHGAP12 13..72 CDD:213003 1/3 (33%)
SH3-WW_linker 69..264 CDD:435468 37/202 (18%)
PRP40 257..>409 CDD:227435 45/239 (19%)
WW 266..296 CDD:238122 5/47 (11%)
PH_ARHGAP9-like 462..573 CDD:270053 14/110 (13%)
RhoGAP_ARHGAP27_15_12_9 651..836 CDD:239868 68/190 (36%)
Blue background indicates that the domain is not in the aligned region.

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