DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP19D and Arhgap23

DIOPT Version :9

Sequence 1:NP_001285496.1 Gene:RhoGAP19D / 33048 FlyBaseID:FBgn0031118 Length:2206 Species:Drosophila melanogaster
Sequence 2:XP_006533928.1 Gene:Arhgap23 / 58996 MGIID:3697726 Length:1489 Species:Mus musculus


Alignment Length:2225 Identity:439/2225 - (19%)
Similarity:669/2225 - (30%) Gaps:939/2225 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PKLIVIRRRPNQGFGFTLRHFIAYPPEDDQASSSASGLVSGSATAATAASVSTNWPQEASSAAGS 116
            |:.:::|:....||||||||||.||||                     ::|.....:|.:...|.
Mouse    41 PRTLLLRKSLQDGFGFTLRHFIVYPPE---------------------SAVHCILKEEENGGRGG 84

  Fly   117 NSGSSSSVGVAGITGLEPTSPTSLPPYQVKAMETIFIKEVQANGPAHYANLQTGDRVLMVNNQPI 181
            ..|..              .|:  |.::::.|:|||:|.|:..||||.|.|:||||::.||.:.|
Mouse    85 RGGGG--------------GPS--PRHRLEPMDTIFVKNVKDGGPAHRAGLRTGDRLVKVNGESI 133

  Fly   182 AGIAYSTIVSMIKQTPAVLTLHVVPKECDVLQMHYTSIAH----TPESNRLTMSTHSPSLLANGS 242
            .|..||.::.:|:.:...|.|.::||:.|:||:.|:..|:    .|.|.........|.|..  .
Mouse   134 IGKTYSQVIGLIQNSDDTLELSIMPKDEDILQLAYSQDAYLKGNEPYSGEARSIPEPPPLCY--P 196

  Fly   243 HKTTFPAAAAVAAPPHQHQQQQQQLISYPAVAAVTTSTPAGSPQSQSQSQSHSHPNTHHAPSLHG 307
            .||..|...|                  ||.|.:.....:..|.......:.|.|          
Mouse   197 RKTYAPPTRA------------------PAWATMVPEPISALPPDPRSPAAWSDP---------- 233

  Fly   308 GSRSGSIT----STASGGITVLSQP-----FYPQQQQQQQQQQQHRHPALTGGSSSIDFGDMAHG 363
            |||..|.|    ..:|.|   :|||     .:|....:.:..:....|......|.::.      
Mouse   234 GSRVPSATRAHLDNSSLG---MSQPRPSPGAFPHLPSESRTPRAFPEPGSRVLPSRLEC------ 289

  Fly   364 LRQHQQQQQHLYQQQQQHHQFMRANQ------PPNLTVLSASSATNTPTPTARQPKSATSHNQAL 422
                ||...|....|...    ||.:      ||.   ..::|.......|...|...::...||
Mouse   290 ----QQALSHWLSNQIPR----RAGERRCPAMPPR---ARSASQDRLEDVTTHHPWPCSTSQDAL 343

  Fly   423 YAVG--------------AGPSSAAGSGSGSL--------SGGSENSDLMIRLRESIKQKEEFLK 465
            ..:|              ....||...|.|:|        ...|:...    .|.|.....:..:
Mouse   344 SQLGQEGWHRARSDDYLSRATRSAEALGPGALVSPRLERCGWASQRPS----ARTSACPSRDLTQ 404

  Fly   466 SPVPASMSSASSINGNQAQSSSPAQQQH---------------------LQQHQQHFFPSHTPPG 509
            :|.|:.:.....|.....:|.||:.|:.                     |.|....|.|..:.| 
Mouse   405 APPPSGLQGLDDIGYIGYRSYSPSFQRRTGLLHALSFRDSPFGGLPTFSLAQSPASFPPEASEP- 468

  Fly   510 GVQVVVPPPRSRHQVMLKQQQQQQQQHQQHHVLGYDMYHSGGKLVQRSSTAPGSVCHQHQQQQQH 574
             .:||.|.|.:|      ..:...:.|:...||             |.....|            
Mouse   469 -PRVVRPDPSTR------ALEPPAEDHRDEVVL-------------RQKPPTG------------ 501

  Fly   575 HLYHQQQHQQLQQTQHRQVMINNNAKYAKDLDYFETLQETGVTNKVFERKLVSHMSKGFDPFKPL 639
                    :::|.|..||:          :|.:.:...|.....:...||:.           ||
Mouse   502 --------RKVQLTPARQM----------NLGFGDESPEPEARGERLGRKVA-----------PL 537

  Fly   640 SINTSALESSASTSSTSATTTVKKQSVLYESLQQHPLAKYHQTQQQTTTTTTVDGQTSSRMELHK 704
                             |||.        :||...|.               :|..||..::|  
Mouse   538 -----------------ATTE--------DSLASIPF---------------IDEPTSPSIDL-- 560

  Fly   705 ATLANATIDPVPVGSSKFVTLPDKPDKGSSVATLADIAESSAAAIVDSASGSGNVV--------- 760
                          .:|.|                     .|:|:|.||..|..|:         
Mouse   561 --------------QAKHV---------------------PASAVVSSAMNSAPVLGTSPSSPTF 590

  Fly   761 -----RRYKPLSSSSFDEGKPMRRISYLRATNNETDFNAEAAAGGDAAATGASGPASASAASSAP 820
                 |.|....||.    |..||.|||.|...|...:.:     |...|...           .
Mouse   591 TFALSRHYSQDCSSI----KAGRRSSYLLAITTERSKSCD-----DGLNTFRD-----------E 635

  Fly   821 GPTPSSAPAPAPAPAPLPISIPIPVAAVVEPQKTKSLVEEHPDPTYDVIGGTGGGHEFIETPNGL 885
            |......|:..|:                    .:.|.....|.:.|    :.|..|..:.|   
Mouse   636 GRVLRRLPSRVPS--------------------LRVLRSFFTDGSLD----SWGTSEDADAP--- 673

  Fly   886 EDVRLSAHGSRRASMSSDMRSSIHIDAELNGKYVPNELEAFETEIEIKSSCINGKRM-SEYRSWR 949
                     |:|.| :||:..:...|....|       ..:..:|..|    .||:. ...|.|:
Mouse   674 ---------SKRHS-TSDLSDATFSDIRREG-------WLYYKQILTK----KGKKAGGGLRQWK 717

  Fly   950 QVKLEIKGDLLRIYSGRHAKSEHNVIELDIRNFKFFDESMDKKKYLIRMQSKPSPSGAHLASLGN 1014
                       |:|:...|:|                .|:.|::      .:|.|:.|..|:.| 
Mouse   718 -----------RVYAVLRARS----------------LSLSKER------REPGPAAAGAAAAG- 748

  Fly  1015 ELNLDEGHDKLLTSSGSSSANEPAANAASALTASTSSS------TCSSGPYTEILFKTKSSNEMK 1073
                          :|...| .|....:..:..|.|.:      ..::..:.|.||:.:..::| 
Mouse   749 --------------AGEDEA-APVCIGSCLVDISYSETKRRHVFRLTTADFCEYLFQAEDRDDM- 797

  Fly  1074 RLFGLLQWKDSLNYDDN-EHQPQG--------KQLAEPQKTVASASYLDDVQGGASAADSSPLSS 1129
                 |.|..::..:.. |.:..|        |:|.:.:|...|:         ...|||||..|
Mouse   798 -----LGWIRAIRENSRAEGEDPGCANQALISKKLNDYRKVSHSS---------GPKADSSPKGS 848

  Fly  1130 HS-GGIADASGSHHVSALPAAAAIVAATSDSISPVMKARKSSSHKHIPDKDLGSPKSKNWKDLLF 1193
            .. ||:.        |......|:....:....|..|           :..:.:||:. |     
Mouse   849 RGLGGLK--------SEFLKQTAVRGLRTQEQPPGSK-----------EDSVAAPKTP-W----- 888

  Fly  1194 RRGGSGSGGVSHHDLASPSACAAKQIGSIGVPLRSCPMSKVNAYVPHLVEVCTNIVETKGLGVVG 1258
                 |...:..:..|:|.|        .|:.|..|..:..|..||.:|..|..|||.:||...|
Mouse   889 -----GINIIKKNKKAAPRA--------FGIRLEECQPATENQRVPLIVAACCRIVEARGLESTG 940

  Fly  1259 IYRIPGNKAAISELSELVN--TKDFQFESCASDDRWEDVNVVSSLLKLFIRSLPDALMPASYYIN 1321
            |||:|||.|.:|.|.|.:|  ..|...:    |:||:|:||:|||||.|.|.||:.|.....|.:
Mouse   941 IYRVPGNNAVVSSLQEQLNRGPSDINLQ----DERWQDLNVISSLLKAFFRKLPEPLFTDDKYND 1001

  Fly  1322 FIEADK-KFGLERIVLLREIVESLPRHPYETMKHLIRHLCRVSGNCDVNRMEPKNLAIIFGPSII 1385
            ||||:: :...||:..||:::..||.|.|||:|.|:.||..::.:.:.|:|||:|||::|||:::
Mouse  1002 FIEANRIEDSRERMKTLRKLIRDLPGHYYETLKFLVGHLKTIADHSEKNKMEPRNLALVFGPTLV 1066

  Fly  1386 RTPNDTLETAVKDMKHQCRIVELLVTQYDYFFEGGSLPDIAEVSGGTAAVSAAQPQQQTQEDQTS 1450
            ||..|.:...|..|..:.:|||.|:...|:||                         ...||:  
Mouse  1067 RTSEDNMTDMVTHMPDRYKIVETLIQHSDWFF-------------------------SDDEDK-- 1104

  Fly  1451 MLLHNLSKIERITERETTRTSRFMPQLRRKTHGKRSAVNSDTYSGESVLVSGSSSNTTTTTTTTT 1515
                                            |:|:.|:.                         
Mouse  1105 --------------------------------GERTPVDD------------------------- 1112

  Fly  1516 HTTSSTSSSNTITTTISTTTIQQRRAQRKAVQSICDQALILLLPTPVSSVSLPFQSLDYAKASAS 1580
                                        |..||:                    .:::|...:..
Mouse  1113 ----------------------------KEPQSV--------------------PNIEYLLPNIG 1129

  Fly  1581 ASASASSTASTSSSSTLHSGGKASASSSSSSTTKFSSSSSSACSTTAVAISSSISATSSKLLSAN 1645
            .:...|...|..|::.      :||.|..|...|     ....:...:|| |.|||.:.|.    
Mouse  1130 RTVPPSDPGSADSTTC------SSAKSKGSWVPK-----KEPYAREMLAI-SFISAVNRKR---- 1178

  Fly  1646 FKKRSTGGFLGSRSSHQTRKASLDEKDSGQSSGSLGHSLGVGINLAKEQQRSSVDISILLTDDDS 1710
             |||.....|||.                                               |||||
Mouse  1179 -KKRREARGLGSS-----------------------------------------------TDDDS 1195

  Fly  1711 SSRLSDTGSMSLTTITDTLDSKLRNLRSGSESNDENGSPEFPKNRRHTLGQPLHMHSENIPYADE 1775
                               :.:......|::...|...|.                    |.|:|
Mouse  1196 -------------------EQEAHKAAVGTQEPPEGQLPG--------------------PAAEE 1221

  Fly  1776 SPERLFHQFCNPLETAPLSLHLSRSCTATNTIGGDEKPSKQSGGVAPLPPSLLKAAHKLQHSATV 1840
            :|.||     :| .|||                 ||:|:                      :.|.
Mouse  1222 APGRL-----SP-PTAP-----------------DERPA----------------------ADTR 1241

  Fly  1841 PIHQGSSTAPTSGAATPVGTPTGSGGAG--AIPSRSSSSSVTTLTK---------SIQPRFSNY- 1893
            .|..|.||..|...:...||.....|||  |...||..|.|.|.|:         |.:|.||:: 
Mouse  1242 SIVSGYSTLSTMDRSVCSGTGGRRAGAGDEADDERSELSHVETDTEGGAGPGGRLSRRPSFSSHH 1306

  Fly  1894 -----------LSYERGNAAAGGAERVVGSAGGAASDDDSEGSTTSDPKEKL-------LLGERP 1940
                       ||..|..|...||    |:|.......:..||.:|..:|.|       .||.||
Mouse  1307 LMPCDTLARRRLSRSRAEAEGPGA----GTARACPRGPEPPGSASSSSQESLRPPAAAPALGSRP 1367

  Fly  1941 SPSFFIERYNKKRRDHRLFRSASFNCRNYSTRHITAQTSGGVAAGVSGGVAGAVAVGVACCQALS 2005
            |.   :|....:.|.                                                  
Mouse  1368 SR---VEALRLRLRG-------------------------------------------------- 1379

  Fly  2006 TTGLTKDEKTDMNLTKKRQIQNKQNRSIKRRHTV-------------------GGPHDYSASNGG 2051
                |.|:...:.|.:....:.::.||..|||||                   |||.:    :.|
Mouse  1380 ----TADDMLAVRLRRPLSPETRRRRSSWRRHTVVVQSPLTDLNFNEWKELGGGGPQE----SVG 1436

  Fly  2052 CSNHSHGHDLAAINYNHHNRHHQQQLLKLGSATSGGGGSGAAAAETTTTTTTTTTVLRRLGTGQA 2116
            ...||...|                             ||.::.|:|                :|
Mouse  1437 VRPHSDNKD-----------------------------SGLSSLEST----------------KA 1456

  Fly  2117 GAEASVALPASSSGS 2131
            .|.::.:||:...|:
Mouse  1457 RASSAASLPSGDLGA 1471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP19DNP_001285496.1 PDZ_signaling <151..205 CDD:238492 23/53 (43%)
RhoGAP_ARHGAP21 1221..1417 CDD:239860 81/198 (41%)
Arhgap23XP_006533928.1 PDZ_signaling 41..156 CDD:238492 47/151 (31%)
PHA03247 <176..578 CDD:223021 98/594 (16%)
PH_ARHGAP21-like 691..811 CDD:269955 29/185 (16%)
RhoGAP_ARHGAP21 903..1098 CDD:239860 82/206 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832391
Domainoid 1 1.000 143 1.000 Domainoid score I4626
eggNOG 1 0.900 - - E1_KOG4407
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 270 1.000 Inparanoid score I2998
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43751
orthoMCL 1 0.900 - - OOG6_104725
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2255
SonicParanoid 1 1.000 - - X1550
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.680

Return to query results.
Submit another query.