DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP19D and RhoGAP18B

DIOPT Version :9

Sequence 1:NP_001285496.1 Gene:RhoGAP19D / 33048 FlyBaseID:FBgn0031118 Length:2206 Species:Drosophila melanogaster
Sequence 2:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster


Alignment Length:1350 Identity:260/1350 - (19%)
Similarity:452/1350 - (33%) Gaps:363/1350 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 TSTPAGSPQSQSQSQSHSHPNTHHAPSLHGGSRSGSITSTASGGITVLSQPFYPQQQQQQQQQQQ 342
            :.|||.:|...:.:...:.|....:.||.|.|:|.:.|.|...|..        :|..:....|:
  Fly   122 SETPAKAPAPSTPTTPPTPPTKVKSRSLLGYSKSSAATLTRLFGSL--------KQLNRSSSLQR 178

  Fly   343 HRHPAL-TGGSSSIDFGDMAHG--------------------LRQHQ----QQQQHLY------Q 376
            ...|.. |.||||....::.|.                    |.|.|    |..||:|      :
  Fly   179 RIFPRTPTTGSSSAGSLEIIHNVDEVFRTQETFDLQRICELKLEQQQLKGSQSDQHIYGRVREPE 243

  Fly   377 QQQQHHQFMRANQPPNLTVLSASSATNTP------------TPTAR-----------QPKSATSH 418
            :.|.|.:..:..:...:.:|...|.:.:.            |...|           ||||..:.
  Fly   244 ESQSHKRERKRPRVSRIRLLQDESTSGSSSLYLNESICQWMTSLRRQVHHYDEGPWQQPKSVPAR 308

  Fly   419 NQALYAVGAGPSSAAGSGSGSLSGGSENS--------DLMIRLRESIKQKEEFLKSPVPASMSSA 475
            :         |||:|...:.:|...:|.|        .|:...:..::||......|.......|
  Fly   309 D---------PSSSAEESTVTLRRSTEESAKCADEQAKLVKDFKRKLQQKRAHNVEPEREQRRCA 364

  Fly   476 SSINGNQAQSSSPAQQQHLQQHQQ-HFFPSHTPPGGVQVVVPPPRSRHQVMLKQQQQQQQQHQQH 539
            .:.|......|:..:::...|||| .....|.  ..|.:.:.|..|   |.|.:..|........
  Fly   365 ITANFVNDYLSALGEEKEAVQHQQVAAIEEHV--AVVAIAIQPQVS---VSLLRLMQSLALSASL 424

  Fly   540 HVLGYDMYHSGGKLVQRSSTAPGSVCHQHQQQQQHHLYHQQQHQQLQQTQHRQVMINN-NAKYAK 603
            ||           .|:...||       :.:.....|:||||.|:      :|..||. ..:.|:
  Fly   425 HV-----------SVRGFLTA-------YDKSFSLWLWHQQQQQR------QQPPINGYRRRRAR 465

  Fly   604 DLDYFETLQETGVTNKVFERKL--------------VSHMSKGFDPFKPLSINTSALESSASTSS 654
            |       ...||... :.|:|              |:..|....|....|::..|..:|...::
  Fly   466 D-------SVVGVVGD-WRRRLPLFAFSFAGGNDRSVASASVSVSPAISESVDVCAAAASRRRAN 522

  Fly   655 TS----ATTTVKKQSVLYESLQQHPLAKYHQTQQQTTTTTTVDGQTSSRMELHKATLANATIDPV 715
            .|    .|..|:::.|.              ..:.:|::.......::....:...|..|   |.
  Fly   523 RSTRRRGTAIVREEGVC--------------GGESSTSSNNSKKNNNNNSNNNSGALMAA---PK 570

  Fly   716 PVGSSKFVTLPDKPDKGSSVATLADIAESSAAAI---------VDSASG-------SGNV----- 759
            |.|.:      ::|...|:..|:...:.::...|         ||:.||       .||.     
  Fly   571 PNGEA------ERPSTNSNNNTINCSSNNNNDNISNNNNNHHTVDNESGINNNKNNDGNANCNVN 629

  Fly   760 ----VRRYKPLSSSSFDEGK------PMRRISYLRATNNETDFNAEAAAGGDAAATGASGPASAS 814
                .::.:|::.:...:.:      |:|..:  .:.:|......|.............|.:.|:
  Fly   630 EQQQQQQQQPITQNCVIKVRRPAPKVPVRNPN--TSLSNPRQIEEEQTKPNGGKKDNLRGNSFAA 692

  Fly   815 AASSAPGPTPSSAPAP-----APAPAPLPISIPIPVAAVVEPQKTKSLVEEHPDPTYDVIGGTGG 874
            ..||.......|...|     ...|....|...:||....|..:     :|..|...|.....|.
  Fly   693 ENSSPEEQEEESIYQPIWQFKTIEPVDQEIIEALPVEGEDEEDE-----DEEDDDVDDEEEDLGD 752

  Fly   875 GHEFIET---PN--GLEDVRLSAHGSRRASMSSDM--RSSIHIDAELNGKYVPNELEAFETEIEI 932
            ..|.:.:   |:  .|:...:.|.|.|....:|.:  ||.:.:...|.......:..|:||::|.
  Fly   753 YDESLPSDADPDVMALQAAAVFAAGVRHKLSTSTLTKRSKMMMPTPLPSPTASMDHGAWETDMEF 817

  Fly   933 KSSCINGKRMSEYRSWRQVKLEIKGDLLRIYS------GRHAKSEHN---------VIELDIRNF 982
            ..|..:.:...|..|...........|..|.|      |:...:..:         |:...:||.
  Fly   818 MYSRESKEEADETLSLGSTVTNSTATLGSISSTGSSVTGQPKDTPKDLPADQQPSVVVHPILRNI 882

  Fly   983 KFFDESMDKKKY----------------LIRMQSKPSPSGAHLASLGNELNLDEGHDKLLTSSGS 1031
            ..|....|.|||                :.|::....|..|.||: .|..:|....|    .||.
  Fly   883 CIFYSQKDPKKYSAIFYDYHLSLVHQRFMTRIRRPAPPPPAQLAT-SNTTSLAPRSD----DSGC 942

  Fly  1032 SSANEPAAN-----------------AASALTASTSSSTCSSGPYTEILFKTKSSNEMKRLFGLL 1079
            |...|.:.|                 ..:.|.|...:......|.|....:.:|:..:.....:|
  Fly   943 SCEAEDSYNHQHNPTPAIPKPLKEEWERAVLAAGAVAGKRGVAPRTGRKLRVRSNARLLLTDSVL 1007

  Fly  1080 QWKDSL---NYDDNEHQPQGKQLAEPQKTVASASYLDDVQGGASAADSSPLSSHS----GGIADA 1137
            .|:::|   |..::|     :.:..|...:..|..:.:.........|:.|..:.    |.:.|.
  Fly  1008 AWRETLQDVNCCEDE-----EDMIVPVTDILRAQQIQEDNEVQQTQQSTILQRYKSVSIGNLLDL 1067

  Fly  1138 SGSHHVSALPAAAAIVAATSDSISPVMKARKSSSHKHIPDKDLGSPKSKNWKDLLFRRGGSGSGG 1202
            .|.....::.....:..|.:.::..:.::.||..            ||::      |||      
  Fly  1068 PGEDDKKSIKNRMRMKFAVNSNVFRINRSPKSEK------------KSRS------RRG------ 1108

  Fly  1203 VSHHDLASPSACAAKQIGSIGV-----PLRSCPMSKV------NAYVPH-LVEVCTNIVETKGLG 1255
                           |:.|:.:     ||.:.|:|.:      :..||. :|:||..|.:.:.:.
  Fly  1109 ---------------QVNSLYLDEQKYPLFAAPLSALELNMTDHPNVPRFVVDVCAYIEQPECIE 1158

  Fly  1256 VVGIYRIPGNKAAISELSELVNTKDFQFESCASDDRW---EDVNVVSSLLKLFIRSLPDALMPAS 1317
            ..|:||..|||..:.||.:.:        :...|.||   :|::.::||.|.|.|.|...|:.. 
  Fly  1159 QDGLYRASGNKVLVDELRKKL--------THVYDPRWLKTDDIHTLTSLHKQFFRELTSPLITQ- 1214

  Fly  1318 YYINFIEADKKFG--------LERIVLLREIVESLPRHPYETMKHLIRHLCRVSGNCDVNRMEPK 1374
                  ||.::.|        :||:.|   ..:.:|.....|::.|||||.||:.....|||...
  Fly  1215 ------EAYERLGRSLNDDAAIERMSL---AFDDMPEPNRSTLRFLIRHLTRVAAASASNRMPST 1270

  Fly  1375 NLAIIFGPSIIRTPNDTLETAVKDMKHQCRIVELLVTQYDYFFEGGSLPD 1424
            ||||::||.::......|:....:|     :.::|:..||..|.    ||
  Fly  1271 NLAIVWGPCLLSANQIQLDIGRMNM-----LAKVLIENYDRIFH----PD 1311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP19DNP_001285496.1 PDZ_signaling <151..205 CDD:238492
RhoGAP_ARHGAP21 1221..1417 CDD:239860 59/218 (27%)
RhoGAP18BNP_573352.2 RhoGAP 1141..1289 CDD:279014 48/165 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23176
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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