DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP19D and arhgap15

DIOPT Version :9

Sequence 1:NP_001285496.1 Gene:RhoGAP19D / 33048 FlyBaseID:FBgn0031118 Length:2206 Species:Drosophila melanogaster
Sequence 2:NP_001122027.1 Gene:arhgap15 / 100003547 ZFINID:ZDB-GENE-070912-314 Length:465 Species:Danio rerio


Alignment Length:598 Identity:127/598 - (21%)
Similarity:233/598 - (38%) Gaps:173/598 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   838 PISIPIPVAAVVEPQKTKSLVEEHPDPTYDVIGGTGGGHEFIETPNGLEDVRLSAHGSRRASMSS 902
            |.::.:|.|..:..:.::|...|....|..::....   |.::.|       ::.|...::..:|
Zfish     4 PPALVLPGAVQLRIKNSQSSTGERLSQTKSMVLPEA---ETLQKP-------INRHRRNQSQHNS 58

  Fly   903 DMRSSIHIDAELNGKYVPNELEAFETEIEIKSSCINGKRMSEYRSWRQVKLEIKGDLLRIYSGRH 967
            ::  |:.:...|.|:|: |:.:..|          .||::.  ::|....:.:..:.|..|....
Zfish    59 EV--SVGLQPVLKGEYL-NKAKIAE----------GGKKLR--KNWTLTWVVLSSNQLLFYKESK 108

  Fly   968 AKSEHNV--------IELDIRNFKFFDESMDKK-----------KYLIRMQSKPSPSGAHLASLG 1013
            .::..|:        ::|:....::..|...:|           ::|::....|:.|..|.|   
Zfish   109 QEAVSNLKPGGKPDGVDLNGAVIEWTTEKSSRKNVIQITTPTGHEFLLQADHFPTISKWHDA--- 170

  Fly  1014 NELNLDEGHDKLLTSSGSSSANEPAANAASALTASTSSSTC-SSGPYTEILFKTKSSNEMKRLFG 1077
                :.:..|.|.:.||..|....|.:.::: |...|..|| ||.|..:   :|||.:....:| 
Zfish   171 ----IKKAVDILSSGSGGQSCGRAALHRSNS-TECLSRPTCESSKPKPK---ETKSEHRRSIMF- 226

  Fly  1078 LLQWKDSLNYDDNEHQPQGKQLAEPQKTVASASYLDDVQGGASAADSSPLSSHSGGIADASGSHH 1142
                  .|||                                ||:||          ||.:|   
Zfish   227 ------KLNY--------------------------------SASDS----------ADKNG--- 240

  Fly  1143 VSALPAAAAIVAATSDSISPVMKARKSSSHKHIPDKDLGSPKSKNWKDLLFRRGGSGSGGVSHHD 1207
                                 :|.|                    .|..:.||            
Zfish   241 ---------------------VKNR--------------------LKKFISRR------------ 252

  Fly  1208 LASPSACAAKQIGSIGVPLRSCPM----SKVNAYVPHLVEVCTNIVETKGLGVVGIYRIPGNKAA 1268
               ||....::.|.|...:..|.|    .:....||..|::|...||.:||...||||:.||.|.
Zfish   253 ---PSMKTLQEKGIIKDRVFGCHMLTLCDREKTTVPKFVKLCVEEVEKRGLEADGIYRVSGNLAI 314

  Fly  1269 ISELSELVNTKDFQFESCASDDRWEDVNVVSSLLKLFIRSLPDALMPASYYINFIEADK-KFGLE 1332
            |.:|..||:.::   |....|.:|||::|::..||:|.|.||:.|.|..::..|:|..| |...:
Zfish   315 IQKLRFLVDQEE---ELDLGDSQWEDIHVITGALKMFFRELPEPLFPFRFFDLFVETIKIKEPTQ 376

  Fly  1333 RIVLLREIVESLPRHPYETMKHLIRHLCRVSGNCDVNRMEPKNLAIIFGPSIIRTPNDTLETAVK 1397
            ::..:::::..||:..:.|||.|..||.||......|.|..:.::|:|||:::....::....| 
Zfish   377 KVQAMKKLIHQLPKPNHNTMKLLFHHLRRVLTKSQKNLMSTQGVSIVFGPTLMWPEFESGNMEV- 440

  Fly  1398 DMKHQCRIVELLV 1410
            :|.:|.:|||.::
Zfish   441 NMVYQNQIVECIL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP19DNP_001285496.1 PDZ_signaling <151..205 CDD:238492
RhoGAP_ARHGAP21 1221..1417 CDD:239860 62/195 (32%)
arhgap15NP_001122027.1 PH 67..175 CDD:278594 19/127 (15%)
PH_ARHGAP9-like 68..176 CDD:270053 19/127 (15%)
RhoGAP_ARHGAP27_15_12_9 269..453 CDD:239868 61/187 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23176
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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