DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT3 and MDR1

DIOPT Version :9

Sequence 1:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_011614.1 Gene:MDR1 / 852992 SGDID:S000003332 Length:950 Species:Saccharomyces cerevisiae


Alignment Length:373 Identity:66/373 - (17%)
Similarity:121/373 - (32%) Gaps:155/373 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PTNLRMSAPIRYYYDLMSQPSRALFII--------------FRLSNMPFEDCVVAL-----RNGE 81
            ||.::..|.:|.::|...:..|.|.::              .|:....:|.|..|:     .:||
Yeast   206 PTMVKEKAKLRLWFDYFRENGRNLAVVQTPMFRKLIRIGVPNRMRGEIWELCSGAMYMRYANSGE 270

  Fly    82 H-----------------LTEDFKKE------------INRFQRVPCIH-----DNGYKLAESVA 112
            :                 :.:|.|:.            |.|.:.|...:     |.||..|.::.
Yeast   271 YERILNENAGKTSQAIDEIEKDLKRSLPEYSAYQTEEGIQRLRNVLTAYSWKNPDVGYCQAMNIV 335

  Fly   113 ILRYLSAKGK---------IPEHLYPKYF--------VDQSRVDEFLE------WQH-------- 146
            :..:|....:         :.:...|.|:        :||...:.|:|      |::        
Yeast   336 VAGFLIFMSEEQAFWCLCNLCDIYVPGYYSKTMYGTLLDQRVFESFVEDRMPVLWEYILQHDIQL 400

  Fly   147 --MSLRLTCAMYFRTVWLEP--------LLTGRTPSEAKIETFRMQ---MERNLDVVEEVWLEGK 198
              :||....:::|.::.||.        .:.|      .|..|::.   ::.|.|.:    |:..
Yeast   401 SVVSLPWFLSLFFTSMPLEYAVRIMDIFFMNG------SITLFQVALAVLKINADDI----LQAD 455

  Fly   199 D-----------FLT--------GSSLTVADIFAACEIEQTRMADYDV---------RIKYPK-- 233
            |           |.|        .|.:....|....|:..|...::.|         |.||.|  
Yeast   456 DDGMFIAIIKHYFQTLGQSAHPDSSDIKYRQITKFQELLVTAFKEFSVISEEMAMHARHKYEKGI 520

  Fly   234 ---IRAWLKRVRQSCNP------------YYDVAHEFV--YKIS-GTG 263
               |..::||.:....|            .||:.::.:  |||| |||
Yeast   521 FQNIETFMKRTQLRHMPKTFNLSSDDLSNIYDMFYQSIETYKISMGTG 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348 20/128 (16%)
GstA 47..243 CDD:223698 52/325 (16%)
GST_C_Theta 135..259 CDD:198292 34/197 (17%)
MDR1NP_011614.1 COG5210 23..531 CDD:227535 55/334 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.