DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT3 and Hpgds

DIOPT Version :10

Sequence 1:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_006236664.1 Gene:Hpgds / 58962 RGDID:69251 Length:200 Species:Rattus norvegicus


Alignment Length:237 Identity:54/237 - (22%)
Similarity:84/237 - (35%) Gaps:85/237 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NLRMSAPIRYYYDLMSQPSRALFIIFRLSNMPFEDCVVALRNGEHLTEDFK----KEINRFQRVP 98
            |:|..|.|..|             ||...::.:||         |..|...    |....|.::|
  Rat    10 NMRGRAEIIRY-------------IFAYLDIKYED---------HRIEQADWPKIKPTLPFGKIP 52

  Fly    99 CIHDNGYKLAESVAILRYLSAKGKIPEHLYPKYFVDQSRVDEFLEW--QHMSLRLTCAMYFRTVW 161
            .:...|..|.:|:||.|||:..    ..|..|..::|.:||..::.  ..|||         ..|
  Rat    53 VLEVEGLTLHQSLAIARYLTKN----TDLAGKTELEQCQVDAVVDTLDDFMSL---------FPW 104

  Fly   162 LE-----------PLLTGRTPSEAKIETFRMQMERNLDVVEEVWLEGKDFLTGS-SLTVADIFAA 214
            .|           .|||.:.|          .:.::||    .:|..|::..|: .:|.||.:  
  Rat   105 AEENQDLKERTFNDLLTRQAP----------HLLKDLD----TYLGDKEWFIGNYQVTWADFY-- 153

  Fly   215 CEIEQT--------------RMADYDVRIK-YPKIRAW-LKR 240
            .:|..|              |:.....::: .|.|.|| |||
  Rat   154 WDICSTTLLVLKPDLLGIYPRLVSLRNKVQAIPAISAWILKR 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348 19/79 (24%)
GST_C_Theta 135..259 CDD:198292 30/136 (22%)
HpgdsXP_006236664.1 GST_N_Sigma_like 4..73 CDD:239337 22/84 (26%)
GST_C_Sigma 82..182 CDD:198328 23/124 (19%)

Return to query results.
Submit another query.