DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT3 and gdap1l1

DIOPT Version :9

Sequence 1:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_687373.1 Gene:gdap1l1 / 562163 ZFINID:ZDB-GENE-080812-2 Length:367 Species:Danio rerio


Alignment Length:155 Identity:33/155 - (21%)
Similarity:56/155 - (36%) Gaps:54/155 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 EHLYPKYFVDQSR------VDEFLEWQHMSLRLTCAMYFRTVWLEPLLTGRTPSEAKI------- 176
            :.:.|||...:.|      ..|.::..|...:||          ||.|:.:....|||       
Zfish   171 DSMIPKYATAEIRRHLANAASELMKLDHEEPQLT----------EPYLSKQKKLMAKILDHDNVN 225

  Fly   177 --ETFRMQMERNLDVVE---------------EVWLEGKDFLTGSSLTVADIFAACEIEQTRMAD 224
              :....::...||.||               |:||.|..|      |:|||.....:.  |:..
Zfish   226 YLKKILGELAMVLDQVEAELEKRKLEYQGQKCELWLCGPTF------TLADICLGATLH--RLKF 282

  Fly   225 YDVRIKY------PKIRAWLKRVRQ 243
            ..:..||      |.::::.:||::
Zfish   283 LGLSRKYWEDGSRPNLQSFFERVQK 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348
GstA 47..243 CDD:223698 33/153 (22%)
GST_C_Theta 135..259 CDD:198292 30/145 (21%)
gdap1l1XP_687373.1 GstA 48..314 CDD:223698 33/155 (21%)
Thioredoxin_like 48..120 CDD:294274
GST_C_GDAP1L1 201..311 CDD:198335 27/125 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589580
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.