DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT3 and grtp1b

DIOPT Version :9

Sequence 1:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001017810.1 Gene:grtp1b / 550508 ZFINID:ZDB-GENE-050417-346 Length:349 Species:Danio rerio


Alignment Length:297 Identity:57/297 - (19%)
Similarity:98/297 - (32%) Gaps:112/297 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LGLSNDEDQLQ----------------VAFDEVLKRRVPSRQPTNLRMSAPIRYYYDLMSQPSRA 58
            :..|..:|||:                ...:||:...:....|.|      |::.:...|...:|
Zfish    90 MAFSGAQDQLERNPGYYQALLKTEQHDPKIEEVIHADMHRTFPDN------IQFRHSSQSCLQKA 148

  Fly    59 LFIIFRLSNMPFEDCVVALRNGEHLTEDFKKEINRFQRVPCIHDNGYKLA----ESVAILRYLSA 119
            ||             .|.|..|.|     .|::...|.:..|  .||.|.    |..:....::.
Zfish   149 LF-------------NVLLAYGHH-----NKDVGYCQGMNFI--AGYLLIITKDEEKSFWLMVAL 193

  Fly   120 KGKIPEHLYPKYF--------VDQSRVDEFLE------WQHMSLR-----LTCAMYFRTVWLEPL 165
            .|:|    .|.|:        |||..:.|.::      ||.|:..     |..:.:|..::::.|
Zfish   194 IGRI----LPDYYTQTMLGLKVDQEVLGELVKSKVPAVWQTMNQHDVMWTLVVSRWFICLYVDVL 254

  Fly   166 LTGRTPSEAKIETFRMQMERNLDVVEEVW----LEGKDFLTGSSLTV----ADIFAACEIEQTRM 222
                     .:||           |..:|    .||...|...:||:    .::     |.|.: 
Zfish   255 ---------PVET-----------VLRIWDCLFYEGSKILFRVALTLIRHNQNL-----ISQAK- 293

  Fly   223 ADYDVRIKYPKIRAWLKRVRQSCNPYYDVAHEFVYKI 259
                   ..|:|....|::.:  ..|.:..|.|:.||
Zfish   294 -------SLPEICEGFKQITR--GEYVEDCHSFMQKI 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348 16/79 (20%)
GstA 47..243 CDD:223698 43/226 (19%)
GST_C_Theta 135..259 CDD:198292 25/142 (18%)
grtp1bNP_001017810.1 TBC 76..289 CDD:214540 47/253 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.