DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstT3 and Tbc1d9

DIOPT Version :9

Sequence 1:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_006255308.1 Gene:Tbc1d9 / 304645 RGDID:1308221 Length:1262 Species:Rattus norvegicus


Alignment Length:185 Identity:40/185 - (21%)
Similarity:65/185 - (35%) Gaps:57/185 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 TEDFKKEINRFQRVPCIHDNGYKLAESVAILRYLSA---KGKIPEHLYPKYFVDQSRVDEFLEWQ 145
            ||.||:.|.:|.|:       :.:.|...::.|.|.   |||:|..                .|.
  Rat   138 TEKFKEAIVKFHRL-------FGMPEEEKLVNYYSCSYWKGKVPRQ----------------GWM 179

  Fly   146 HMSLRLTCAMYF------RTV--W-----LEPLLTGRTPSEAKI----------------ETFRM 181
            ::|:...|...|      :.|  |     ||...|...|...|:                |||::
  Rat   180 YLSINHLCFSSFLMGREAKLVIRWVDITQLEKNATLLLPDMIKVSTRSSEHFFSVFLNINETFKL 244

  Fly   182 QMERNLDVVEEVWLEGKDFLTGSSLTVADIFAACEIEQTRMADYDVRIKYPKIRA 236
             ||:..::.....|:.:.|....||......:..::...: .|.|.|.|..:.||
  Rat   245 -MEQLANIAMRQLLDNEGFEQDRSLPKLKKKSPKKVSALK-RDLDARAKSERYRA 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348 10/39 (26%)
GstA 47..243 CDD:223698 40/185 (22%)
GST_C_Theta 135..259 CDD:198292 26/131 (20%)
Tbc1d9XP_006255308.1 PH-GRAM1_TCB1D9_TCB1D9B 157..255 CDD:275420 22/114 (19%)
PH-GRAM2_TCB1D9_TCB1D9B 304..399 CDD:270161
TBC 510..720 CDD:214540
EFh <891..921 CDD:298682
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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