DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstT3 and Sgsm2

DIOPT Version :9

Sequence 1:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_006246802.1 Gene:Sgsm2 / 303304 RGDID:1306957 Length:1050 Species:Rattus norvegicus


Alignment Length:245 Identity:54/245 - (22%)
Similarity:83/245 - (33%) Gaps:85/245 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LKRRVPSRQPTNLRMSAPIRYYYDLMSQPSRALFIIFRLSNM---PFEDCVVA------------ 76
            :::|..|...:..|::|..|.|.:.:.|.||.. :::..:|:   |.||....            
  Rat   225 IRKRHSSGSASEDRLAACAREYVESLHQNSRTR-LLYGKNNVLVQPKEDMEAVPGYLSLHQSAEN 288

  Fly    77 ---------LRNGEHLTEDFKKEIN-------RFQRVPCIHDNGYKLAESVAILRYLSAKG--KI 123
                     |.||.....:.:|.:.       .|.::.|:|.:..|   |...|..:|..|  :.
  Rat   289 LTLKWTPNQLMNGTLGDSELEKSVYWDYALVVPFSQIVCVHCHQQK---SGGTLVLVSQDGIQRP 350

  Fly   124 PEHLYPKYFVDQSRVDEFLEWQHMSLRLTCAMYFRTVWLEPLLTGRTPSEAKIETFRMQMERNLD 188
            |.|              |.:..|:...|:|           |..|..|        |.|:|..| 
  Rat   351 PLH--------------FPQGGHLLSFLSC-----------LENGLLP--------RGQLEPPL- 381

  Fly   189 VVEEVWLE---GKDF---LTGSSLTVADIFAACEIEQTRMADYDVRIKYP 232
                 |.:   ||.|   ...||:...|   |.|:...|..||..||.||
  Rat   382 -----WTQQGKGKVFPKLRKRSSIRSID---AEELGVGRATDYVFRIIYP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348 20/106 (19%)
GstA 47..243 CDD:223698 49/225 (22%)
GST_C_Theta 135..259 CDD:198292 27/104 (26%)
Sgsm2XP_006246802.1 RUN 42..189 CDD:280855
PH_RUTBC 256..424 CDD:275431 45/214 (21%)
TBC <838..1006 CDD:214540
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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