DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstT3 and Sgsm1

DIOPT Version :9

Sequence 1:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_017453793.1 Gene:Sgsm1 / 288743 RGDID:1308178 Length:1096 Species:Rattus norvegicus


Alignment Length:123 Identity:27/123 - (21%)
Similarity:52/123 - (42%) Gaps:31/123 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LASLLGLSNDEDQLQVAFDEVLKRRVPSRQPTNLRMSAPIRYYYDLMSQPSRALFIIFRLSNMPF 70
            ||.||.:.:||......|.|::||         :..:.|.....|......|:|..|  |.:..|
  Rat   933 LAPLLVILDDEALAFSCFTELMKR---------MNQNFPHGGAMDTHFANMRSLIQI--LDSELF 986

  Fly    71 EDCVVALRNGEH---------LTEDFKKEINRFQRVPCIHDNGYKLAESVAILRYLSA 119
            |   :..:||::         ...|||:|:        ::|:.:.:.|::...:::|:
  Rat   987 E---LMHQNGDYTHFYFCYRWFLLDFKREL--------VYDDVFSVWETIWAAKHVSS 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348 16/84 (19%)
GstA 47..243 CDD:223698 16/82 (20%)
GST_C_Theta 135..259 CDD:198292
Sgsm1XP_017453793.1 RUN 44..186 CDD:397055
PH_RUTBC 257..428 CDD:275431
TBC <884..1053 CDD:214540 27/123 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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