DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstT3 and Vars1

DIOPT Version :9

Sequence 1:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_445744.1 Gene:Vars1 / 25009 RGDID:3950 Length:1264 Species:Rattus norvegicus


Alignment Length:150 Identity:33/150 - (22%)
Similarity:60/150 - (40%) Gaps:39/150 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 MSLRLTCAMYFRTVWLEPLLTGRTPSEAKIETFRMQMERNLDVVEEVWLEG-KDFLTGSSLTVAD 210
            :.|:||..:.||.|:|..::  |.....|:......:...|||:..|.|:| .|.|..|:|..::
  Rat   836 LGLKLTEKLPFREVYLHAIV--RDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSE 898

  Fly   211 IFAACEIEQTRMADY------------------------DVRIKYPKIRAWLKRVRQSCNPYYDV 251
            :..|   ::.:.||:                        |:.:...:|..:    |..||..:: 
  Rat   899 VEKA---KEGQRADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGY----RHFCNKLWN- 955

  Fly   252 AHEFVYKISGTG----PQAK 267
            |.:|..:..|.|    |.:|
  Rat   956 ATKFALRGLGKGFVPSPTSK 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348
GstA 47..243 CDD:223698 24/120 (20%)
GST_C_Theta 135..259 CDD:198292 29/136 (21%)
Vars1NP_445744.1 GstA <56..203 CDD:223698
GST_C_family 92..213 CDD:295467
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..296
PTZ00419 282..1264 CDD:240411 32/149 (21%)
ValRS_core 335..938 CDD:185677 23/106 (22%)
'HIGH' region 344..354
tRNA-synt_1_2 513..640 CDD:290334
'KMSKS' region 862..866 1/3 (33%)
Anticodon_Ia_Val 938..1075 CDD:153416 9/42 (21%)
Val_tRNA-synt_C 1196..1258 CDD:287436
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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