DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstT3 and Rabgap1

DIOPT Version :9

Sequence 1:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001349885.1 Gene:Rabgap1 / 227800 MGIID:2385139 Length:1064 Species:Mus musculus


Alignment Length:188 Identity:40/188 - (21%)
Similarity:70/188 - (37%) Gaps:56/188 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SFLASLLGLSNDEDQLQVAFDEVLKRRVPSRQPTNLRMSAPIRYYYDLMSQPSRALFIIFRLSNM 68
            ||||::|.|...|:|   ||..::|                |.:.|.|     |.||      ..
Mouse   647 SFLAAVLLLHMPEEQ---AFSVLVK----------------IMFDYGL-----RELF------KQ 681

  Fly    69 PFEDCVVALRNGEHLTEDFKKEINRFQRVPCIHDNGYKLA------ESVAILRYLSAKGKIPEHL 127
            .|||........|.|.:::         :|.::::...::      .|...|...:||       
Mouse   682 NFEDLHCKFYQLERLMQEY---------IPDLYNHFLDISLEAHMYASQWFLTLFTAK------- 730

  Fly   128 YPKYFVDQSRVDEFLEWQHMSLRLTCAMYFRTVWLEPLLTGRTPSEAKIETFRMQMER 185
            :|.|.|  ..:.:.|..:.:|:....|:.......:.||.  |..|..::.||:|:.:
Mouse   731 FPLYMV--FHIIDLLLCEGISVIFNVALGLLKTSKDDLLL--TDFEGALKFFRVQLPK 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348 15/81 (19%)
GstA 47..243 CDD:223698 28/145 (19%)
GST_C_Theta 135..259 CDD:198292 10/51 (20%)
Rabgap1NP_001349885.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..101
PTB_Rab6GAP 140..268 CDD:269922
DUF3694 302..432 CDD:315198
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 478..520
TBC 558..767 CDD:214540 33/167 (20%)
ERM 789..1013 CDD:330563
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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