DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstT3 and Mars1

DIOPT Version :9

Sequence 1:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001165053.1 Gene:Mars1 / 216443 MGIID:1345633 Length:910 Species:Mus musculus


Alignment Length:164 Identity:32/164 - (19%)
Similarity:59/164 - (35%) Gaps:64/164 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LSNMPFEDCVVALRNGEHLTEDFKKEINRFQRVPCIH-DNGYKLAESVAILRYLSAKGKIPEHLY 128
            :|.:..|:|||..     ||.         .:||.:. |:|..|..:.||.||            
Mouse    30 ISTVGPEECVVPF-----LTR---------PKVPVLQLDSGNYLFSASAICRY------------ 68

  Fly   129 PKYFV-----DQSRVDEFLEWQHMSLRLTCAMYFRTVWLEPLLTGRTPSEAKIETFRMQMERNLD 188
              :|:     .....:::|||:             ...|:|:|:      |.:....:|.::..|
Mouse    69 --FFLLCGWEQDDLTNQWLEWE-------------ATELQPVLS------AALHCLVVQGKKGED 112

  Fly   189 VV-----------EEVWLEGKDFLTGSSLTVADI 211
            ::           ..:..:...||.|.:.::|||
Mouse   113 ILGPLRRVLTHIDHSLSRQNCPFLAGDTESLADI 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348 16/56 (29%)
GstA 47..243 CDD:223698 32/164 (20%)
GST_C_Theta 135..259 CDD:198292 15/88 (17%)
Mars1NP_001165053.1 Thioredoxin_like 1..68 CDD:294274 14/51 (27%)
GstA <47..189 CDD:223698 25/133 (19%)
GST_C_MetRS_N 77..179 CDD:198340 15/89 (17%)
PRK12268 266..821 CDD:237029
MetRS_core 267..635 CDD:173907
'HIGH' region 275..285
'KMSKS' region 595..599
Anticodon_Ia_Met 644..773 CDD:153411
MetRS_RNA 855..899 CDD:238475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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