DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1695 and USP6NL

DIOPT Version :9

Sequence 1:NP_728346.2 Gene:CG1695 / 33046 FlyBaseID:FBgn0031116 Length:1192 Species:Drosophila melanogaster
Sequence 2:XP_006717605.1 Gene:USP6NL / 9712 HGNCID:16858 Length:856 Species:Homo sapiens


Alignment Length:198 Identity:45/198 - (22%)
Similarity:88/198 - (44%) Gaps:24/198 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   979 NLHRIEKDVQRCDRNYWYFANE---NLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDES 1040
            ::.:|:.||.|..|::..|.:.   ....|.:|::.|...:.:|||.|||..:.|.||:..::|.
Human   168 DIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEED 232

  Fly  1041 LSYSCFCKLMER--------MIENFPSGGAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFC 1097
             ::....||...        .::.||.......|.   ..::....|::...:||...||.|| .
Human   233 -AFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHH---EKILNKFLSKLKQHLDSQEIYTSFY-T 292

  Fly  1098 YRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVL-FLALALLETYRDIILSNSMDFTDVIKF 1161
            .:||...|.....:......|::     :|..|..|| .::..:|:.::..::..||:  ::::|
Human   293 MKWFFQCFLDRTPFTLNLRIWDI-----YIFEGERVLTAMSYTILKLHKKHLMKLSME--ELVEF 350

  Fly  1162 FNE 1164
            |.|
Human   351 FQE 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1695NP_728346.2 RUN 63..237 CDD:280855
PH_RUTBC 310..485 CDD:275431
SRP68-RBD <648..>713 CDD:304552
TBC 947..1124 CDD:214540 35/155 (23%)
USP6NLXP_006717605.1 TBC 125..340 CDD:214540 40/181 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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