DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1695 and Tbc1d8

DIOPT Version :9

Sequence 1:NP_728346.2 Gene:CG1695 / 33046 FlyBaseID:FBgn0031116 Length:1192 Species:Drosophila melanogaster
Sequence 2:XP_006244913.1 Gene:Tbc1d8 / 680133 RGDID:1595491 Length:1150 Species:Rattus norvegicus


Alignment Length:601 Identity:104/601 - (17%)
Similarity:200/601 - (33%) Gaps:197/601 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   745 DNDFSDISDPGDLFDEPELGQEAEEQEQSNLEEEVFEKQEDEEDQEDHDQREM-PRLSEKLVLEF 808
            :.|||...:..::|...|  |.|:...:..|:.|||:...|.::.....:|:: .|...:....|
  Rat   243 ERDFSTFLNLDEVFKIME--QLADVTLRRLLDNEVFDLDPDLQEPSQITKRDLEARAQNEFFRAF 305

  Fly   809 QNIDNMEPLRLQEN-----------------------CFADSETENDLGLGLDSSGNILM----- 845
            ..:...|.|....:                       |||..|         |...::::     
  Rat   306 FRLPRKEKLHAVVDCSLWTPFSRCHTAGRIFSSDSYICFASRE---------DGCCHVVLPLREV 361

  Fly   846 LSIKSSPSTSSY---------ETVGNEFLDMAEAKLEEEEPPGQLSKFHSADDVRLD-NQDEEES 900
            :||:....||..         ..:..:|:::.:.:...|....:|.:.|:...|..: :..:::.
  Rat   362 VSIEKMEDTSLLPNPIIVSIRSKMAFQFIELKDRENLVEGLLLRLKQVHANHPVHYETSPSDDDM 426

  Fly   901 SQP---ATAVIITEAASLDALDDDPTEEFTSRKTSLMSPLNEDITVVASLDALQEP--------- 953
            :.|   :|::...:...|:.:....:||....|:.|..|  |.:|.|......|.|         
  Rat   427 ASPVFYSTSICTDKFGDLEMVSSQSSEEREKEKSPLPHP--EPLTAVFQQSGSQSPDSRLSREQI 489

  Fly   954 -------------KSAC------------------------------VSPASSNGGVYSVELLEQ 975
                         ::.|                              |:..:|:.|.|. .|:||
  Rat   490 KISLWNDHFAEYGRTVCMFRTEKIRKLVAMGIPESLRGRLWLLFSDAVTDLASHPGYYG-NLVEQ 553

  Fly   976 -FG---LNLHRIEKDVQRCDRNYWYFANE-NLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVI 1035
             .|   |....||:|:.|....:..|.|| .:..||.|::.|...:..:||.|.| :::..:|::
  Rat   554 SLGRCCLVTEEIERDLHRSLPEHPAFQNETGIAALRRVLTAYAHRNPKIGYCQSM-NILTSVLLL 617

  Fly  1036 FDDESLSYSCFCKLMERMIENFPS----GGAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHF-Y 1095
            :..|..::.....:.|||:.::.:    |..:|.....     :::...:.:|.:...|.:.. .
  Rat   618 YAKEEEAFWLLVAVCERMLPDYFNHRVIGAQVDQSVFE-----ELIKEHLPELAEHMSDLSALAS 677

  Fly  1096 FCYRWFLLDFKREL------------VYDDVFATWEVIWAAKHIASGHFVLFLALALLETYRD-- 1146
            ....|||..|...:            .||.:.|.::                |.||:||...:  
  Rat   678 ISLSWFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQ----------------LGLAVLEANAEEL 726

  Fly  1147 ----------IILSNSMD---------------------------FTDVIKFFNEMAERHNAQSI 1174
                      :|||..:|                           .||:.....:..|:...||:
  Rat   727 CSSKDDGQALMILSRFLDHIKNEDSPGPPIGSHHAFFSDDQEPCPVTDIADLIRDSYEKFGNQSV 791

  Fly  1175 LQLS------RSLVLQ 1184
            .|:.      |..|||
  Rat   792 EQIEHLRCKHRIRVLQ 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1695NP_728346.2 RUN 63..237 CDD:280855
PH_RUTBC 310..485 CDD:275431
SRP68-RBD <648..>713 CDD:304552
TBC 947..1124 CDD:214540 43/250 (17%)
Tbc1d8XP_006244913.1 PH-GRAM1_TBC1D8 171..269 CDD:270156 7/27 (26%)
PH-GRAM2_TBC1D8 311..406 CDD:270160 13/103 (13%)
TBC 520..726 CDD:214540 45/228 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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