DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1695 and Sgsm1

DIOPT Version :10

Sequence 1:NP_728346.2 Gene:CG1695 / 33046 FlyBaseID:FBgn0031116 Length:1192 Species:Drosophila melanogaster
Sequence 2:XP_006535185.1 Gene:Sgsm1 / 52850 MGIID:107320 Length:1148 Species:Mus musculus


Alignment Length:1260 Identity:574/1260 - (45%)
Similarity:740/1260 - (58%) Gaps:209/1260 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AETELKERLIASVKKEVKQLMEEAVTKKYVHEESSSVTSLCGAVEACLSHGLRRRALGLFKTSST 89
            ||.|.::||:.:|||||||:||||||:|:|||:||.:.|.|.|||||:.|||||||.|..:::..
Mouse     6 AEAETRQRLLRTVKKEVKQIMEEAVTRKFVHEDSSHIISFCAAVEACVLHGLRRRAAGFLRSNKI 70

  Fly    90 TALIQKIAKICPEADYVSRRLLELELAQES--HAVSGKRSSCSSDSIIK-PKLLSKGSGSSNSVT 151
            .||..|:.|..|.|:.:||::.|||...||  :.:.|.:     :::.| |||.:          
Mouse    71 AALFMKVGKGFPPAEELSRKVQELEQLIESARNQIQGLQ-----ENVRKLPKLPN---------- 120

  Fly   152 TINTVTNGAGAGPGGGGGASAPLG-KYLWIRLALHEKRLAKIIEHLVSNANSYYDREALVADPDY 215
                               .:||. |:||||.||.|:.|.||:.:||.|::.||::|||:.||..
Mouse   121 -------------------LSPLAIKHLWIRTALFERVLDKIVHYLVENSSKYYEKEALLMDPVD 166

  Fly   216 GSILSSLLVGPCALEFTRAKTADHYWSDPCADELVQRHRISSGN-RTPPTTHRPIINFKRSLHTS 279
            |.||:||||||||||:|:.|||||:|:||.||||||||||.|.: |....|.||.:..::. |  
Mouse   167 GPILASLLVGPCALEYTKMKTADHFWTDPSADELVQRHRIHSSHLRQDSPTKRPALCIQKR-H-- 228

  Fly   280 SEDTSSGSFKACSPASVAKDYVESLHQNSRTTLLYGKNNVLVLPKDVSEPMPGYLSLHQSIQSLT 344
                ||||... .|:..|:|||||||||||.|||||||||||.|:|..|.:||||||||:...:|
Mouse   229 ----SSGSMDD-RPSISARDYVESLHQNSRATLLYGKNNVLVQPRDDMEAVPGYLSLHQTADVMT 288

  Fly   345 IKWTPNQLMNGYNDGD-GGDKSFYWSYALNINVDEIVYVHCHQNRGGDTGGTIILVGQDGVQRPP 408
            :|||||||||| :.|| ..:||.||.||:.|.::||||:||||.  .|:|||::||.|||:||||
Mouse   289 LKWTPNQLMNG-SVGDLDYEKSVYWDYAVTIRLEEIVYLHCHQQ--VDSGGTVVLVSQDGIQRPP 350

  Fly   409 IHFPEGGHLQAFLSCLETGLLPHGQLDPPLWSQRGIGKLFPWPKSVRRHILPSVMEAGGSVTDET 473
            ..||:||||..||||||.|||||||||||||||||.||:|  ||..:|....|.........|:.
Mouse   351 FRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVF--PKLRKRSPQGSSESTSSDKEDDE 413

  Fly   474 PIDYVFRVVSKCQHEEFLA------SHPI--------LELGRS---------------------- 502
            ..|||||::......||:|      ..|:        |..|:|                      
Mouse   414 ATDYVFRIIYPGTQSEFVALDLMGSPRPVSIGPAWMMLAAGQSMLVVAKGLQWAQTRGCLTIPTR 478

  Fly   503 --------------------------SPRRKHLGSCSTTGSSDCSSKSLSIDQSSCETPLIQASQ 541
                                      |||:....|||.:||:|..|      .:.|.      .:
Mouse   479 SVKEQPPMPQDLMDVSMNNLPPLWQPSPRKSSCSSCSQSGSADGGS------TNGCN------HE 531

  Fly   542 STSIELVCSTMRRQIISRAFYGWLAYCRHLSTVRTHLSGLVNGRIM-PDLAADE-EGLTRGKWLA 604
            ...::|:|..|:.||:||||||||||||||||||||||.|||..|: |||..|. :|||...|..
Mouse   532 RAPLKLLCDNMKYQILSRAFYGWLAYCRHLSTVRTHLSALVNHMIVSPDLPCDAGQGLTASIWEK 596

  Fly   605 MHEDGVVTGDLELYRLVYFGGVEPELRKEVWPYLLGHYDFGSTPEERKKQDETCKHYYETTMSEW 669
            ..:|.....:.||.||:|:|||:||:|:.|||:|||||.||.|..|||:.||.....|..|||||
Mouse   597 YIQDSTTYPEQELLRLIYYGGVQPEIRRAVWPFLLGHYQFGMTEMERKEVDEQIHACYAQTMSEW 661

  Fly   670 LAVEAIVRQREKEKTALAVAKLSAEQA-------RLAANATSSSNPHQKLANGSQQLQLEHGNGE 727
            |..||||||||:|..|.|:||.|:..:       .|..::|.|:...|..::|.|.|:|:..:..
Mouse   662 LGCEAIVRQRERESHAAALAKCSSGASLDSHLHRMLHRDSTISNESSQSCSSGRQNLRLQSDSSS 726

  Fly   728 EDQENLVLDEGENDVFD---DNDFSDI--SDPGDLFDEPELGQEAEEQEQSNLEEEVFEKQEDEE 787
            ..|....:||.|....:   :.....|  .:|.:....|:.|..:.....|.|.|. .|.....|
Mouse   727 STQVFESVDEVEQTEAEGRSEEKHPKIPNGNPANGTCSPDSGHPSSHNFSSGLSEH-SEPSLSTE 790

  Fly   788 DQEDHDQREMPRLSEKLVLEFQNIDNMEPLRLQENCFADSETENDLGLGLDSSGNILMLSIKSSP 852
            |.....||.:|.:             ..|        .||..|:.                :||.
Mouse   791 DSVLDAQRSLPAV-------------FRP--------GDSSVEDG----------------QSSE 818

  Fly   853 STSSYETVGNEFL---DMAEAKLEEEEPPGQLSKFHSADDVRLDNQD-------EEESSQPATAV 907
            :|:|.:....|.|   |..|:.|...|...:......:.||.|..:|       ..|:.:|    
Mouse   819 ATTSRDEAPREELAVQDSLESDLLANESLEEFMSIPGSLDVALPEKDGAVMDGWPGEADKP---- 879

  Fly   908 IITEAASLDALDDDPTEEFTSRKTSLMSPLNEDITVVASLDALQEPKSACVSPASSNGGVYSVEL 972
              :.|.|.|.|.::|..|      ||...|       ||| |:....:...||.||:|..||.||
Mouse   880 --SRADSEDNLSEEPEME------SLFPAL-------ASL-AVTSSANNEASPVSSSGVTYSPEL 928

  Fly   973 LEQFGLNLHRIEKDVQRCDRNYWYFANENLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFD 1037
            |:.:.:||||||||||||||:||||...||:||||::.:|:|:|:::||:||||||:||||||.|
Mouse   929 LDLYTVNLHRIEKDVQRCDRSYWYFTAANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILD 993

  Fly  1038 DESLSYSCFCKLMERMIENFPSGGAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFL 1102
            ||:|::|||.:||:||.:|||.|||||.|||||||||||||||:::||..|||||||||||||||
Mouse   994 DEALAFSCFTELMKRMNQNFPHGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFL 1058

  Fly  1103 LDFKRELVYDDVFATWEVIWAAKHIASGHFVLFLALALLETYRDIILSNSMDFTDVIKFFNEMAE 1167
            |||||||||||||:.||.||||||::|.|:|||:||||:|.||||||.|:|||||:|||||||||
Mouse  1059 LDFKRELVYDDVFSVWETIWAAKHVSSAHYVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAE 1123

  Fly  1168 RHNAQSILQLSRSLVLQLQTIIENK 1192
            ||||:.||||:|.||.::|.:||||
Mouse  1124 RHNAKQILQLARDLVHKVQILIENK 1148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1695NP_728346.2 RUN_SGSM1_like 39..233 CDD:439049 86/197 (44%)
PH_RUTBC 310..485 CDD:275431 105/175 (60%)
TBC 947..1124 CDD:214540 121/176 (69%)
Sgsm1XP_006535185.1 RUN_SGSM1 20..196 CDD:439065 94/209 (45%)
PH_RUTBC 254..425 CDD:275431 105/175 (60%)
TBC <936..1105 CDD:214540 126/168 (75%)

Return to query results.
Submit another query.