DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1695 and Tbc1d17

DIOPT Version :10

Sequence 1:NP_728346.2 Gene:CG1695 / 33046 FlyBaseID:FBgn0031116 Length:1192 Species:Drosophila melanogaster
Sequence 2:NP_001036120.1 Gene:Tbc1d17 / 233204 MGIID:2449973 Length:645 Species:Mus musculus


Alignment Length:447 Identity:116/447 - (25%)
Similarity:181/447 - (40%) Gaps:96/447 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   800 LSEKLVLEFQNIDNMEPLRLQENCFADSETENDLGLGLDSSGNILMLSIKSSPST--SSYETVGN 862
            ||..|:|.....|:...|...::..|.|::.:.|.|....|.|::...::...||  ||:..|.|
Mouse   167 LSRYLLLASSPQDSRLYLVFPQDPSALSDSFHHLQLFDQDSSNVVSRFLQDPYSTTFSSFSRVTN 231

  Fly   863 EFLDMAE-----------AKLEEEEP-PGQLSKFHSADDVRLDNQDEEESSQPATAVIITEAASL 915
            .|....:           ..|.::|| ||    |.....|.|..:...|.:.|.|          
Mouse   232 FFRGALQPHPEGASSPNLPPLPDDEPEPG----FEVISCVELGQRPTVERAPPVT---------- 282

  Fly   916 DALDDDPTEEFTSRKTSLMSPLNEDITVVASLDALQEPKSACVSPASSNG----------GVYSV 970
                   .||:           |..:.....|..:.|.|:...|...|.|          |..|.
Mouse   283 -------EEEW-----------NRYVGPEGRLQNVPELKNRIFSGGLSPGLRREAWKFLLGYLSW 329

  Fly   971 ELL-------------EQFGLNLH--------------------RIEKDVQRCDR-NYWYFANEN 1001
            |..             |.|.:.|.                    .||:||.|.|| |.:|...||
Mouse   330 ESSAEEHKAHVRKKTDEYFRMKLQWKSVSAEQERRNSLLHGYRSLIERDVSRTDRTNKFYEGPEN 394

  Fly  1002 --LDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENF-PSGGAM 1063
              |..|.:::.||...|.|:||:|||.||::|:|.:..:|..::.|||..||.:..|| .|...|
Mouse   395 PGLSLLHDILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDAFWCFCGFMELVHGNFEESQETM 459

  Fly  1064 DMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIA 1128
            ......:..|:::||..:.|.:||. |.....||:||.|:.||||..:.||...|||:|..  :.
Mouse   460 KRQLGQLLLLLRVLDQPLCDFLDSQ-DSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTG--LP 521

  Fly  1129 SGHFVLFLALALLETYRDIILSNSMDFTDVIKFFNEMAERHNAQSILQLSRSLVLQL 1185
            ..:..|.:|.|:|:..||.::.:.....:::|..||:..:.:.:.:|..:.:|..||
Mouse   522 GPNLHLLVACAILDMERDTLMLSGFGSNEILKHINELTMKLSVEDVLTRAEALYRQL 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1695NP_728346.2 RUN_SGSM1_like 39..233 CDD:439049
PH_RUTBC 310..485 CDD:275431
TBC 947..1124 CDD:214540 70/223 (31%)
Tbc1d17NP_001036120.1 PH_RBD 7..204 CDD:432305 10/36 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..85
Required for interaction with OPTN. /evidence=ECO:0000250 217..309 24/123 (20%)
TBC 307..542 CDD:214540 73/237 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 596..645
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.